RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	LONP1	P36776	959 aa	Known RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	ZNF77	Q15935	545 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	SDHAF4	Q5VUM1	108 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	DAB2IP	Q5VWQ8	1189 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	NAIF1	Q69YI7	327 aa	Predicted RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	TCEAL6	Q6IPX3	200 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	PSAPL1	Q6NUJ1	521 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	TMEM86A	Q8N2M4	240 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	KRI1	Q8N9T8	703 aa	Known RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	CHD6	Q8TD26	2715 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	CACTIN	Q8WUQ7	758 aa	Known RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	EZH1	Q92800	747 aa	Predicted RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	TCEAL3	Q969E4	200 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	HVCN1	Q96D96	273 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	CYP2S1	Q96SQ9	504 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	EDEM2	Q9BV94	578 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	DDX43	Q9NXZ2	648 aa	Known RBP	18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	TRAV19	A0A0A6YYK7	116 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	C4orf47	A7E2U8	309 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	HUS1	O60921	280 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	BMP15	O95972	392 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	ADSS	P30520	456 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	IFNAR2	P48551	515 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	DGKE	P52429	567 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	MYL7	Q01449	175 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	PSMD2	Q13200	908 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	EML3	Q32P44	896 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	USP39	Q53GS9	565 aa	Known RBP	18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	INTS6L	Q5JSJ4	861 aa	Known RBP	18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	FSIP1	Q8NA03	581 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	RASSF8	Q8NHQ8	419 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	SPATA18	Q8TC71	538 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	LARP4B	Q92615	738 aa	Known RBP	18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	GTF3C4	Q9UKN8	822 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	L1RE1	Q9UN81	338 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	AGAP1	Q9UPQ3	857 aa		18.86	■□□□□ 0.61
TMEM53-209	ENST00000495630	ATG2B	Q96BY7	2078 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	TADA3	O75528	432 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	CKM	P06732	381 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	TCF3	P15923	654 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	NOVA1	P51513	510 aa	Known RBP	18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	TFAM	Q00059	246 aa	Known RBP	18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	CFAP221	Q4G0U5	840 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	LRRC52	Q8N7C0	313 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	STKLD1	Q8NE28	680 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	SLC22A12	Q96S37	553 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	PKMYT1	Q99640	499 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	STRA6	Q9BX79	667 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	TRPC7	Q9HCX4	862 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	GDAP2	Q9NXN4	497 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	GCNT4	Q9P109	453 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	WNT6	Q9Y6F9	365 aa		18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.85	■□□□□ 0.61
TMEM53-209	ENST00000495630	KHNYN	O15037	678 aa	Known RBP	18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	LDHA	P00338	332 aa	Known RBP	18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	HDC	P19113	662 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	POLR2B	P30876	1174 aa	Known RBP	18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	GBP1	P32455	592 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	LHX1	P48742	406 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	USP4	Q13107	963 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	CSGALNACT2	Q8N6G5	542 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	C1orf127	Q8N9H9	656 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	TSTD1	Q8NFU3	115 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	SH3RF2	Q8TEC5	729 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	FUBP3	Q96I24	572 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	FAM213A	Q9BRX8	229 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	IKZF4	Q9H2S9	585 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	LINC00597	Q9H2U6	94 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	SEL1L	Q9UBV2	794 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	EXOC7	Q9UPT5	735 aa		18.84	■□□□□ 0.61
TMEM53-209	ENST00000495630	GABRD	O14764	452 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	PPP1R37	O75864	691 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	ITGB3	P05106	788 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	PFKL	P17858	780 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	ACAT1	P24752	427 aa	Known RBP	18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	GJB2	P29033	226 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	PCSK1	P29120	753 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	PDE6C	P51160	858 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	PMS2CL	Q68D20	193 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	BRSK2	Q8IWQ3	736 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	TOP6BL	Q8N6T0	577 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	USP33	Q8TEY7	942 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	ARHGAP26	Q9UNA1	814 aa		18.83	■□□□□ 0.6
TMEM53-209	ENST00000495630	CACNA1G	O43497	2377 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	LNP1	A1A4G5	178 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630		K7EQS6	105 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	GIPC1	O14908	333 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	NFATC1	O95644	943 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	CEACAM1	P13688	526 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	CSRP1	P21291	193 aa	Known RBP	18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	MAGEA11	P43364	429 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	RBP5	P82980	135 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	GRIN1	Q05586	938 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	KCNB1	Q14721	858 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	ERICH6B	Q5W0A0	696 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	FAM171B	Q6P995	826 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	DPH6	Q7L8W6	267 aa		18.82	■□□□□ 0.6
TMEM53-209	ENST00000495630	DYM	Q7RTS9	669 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms