RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 FKBP15Q5T1M5 1219 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 CYP4A22Q5TCH4 519 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ADHFE1Q8IWW8 467 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 CRYBG2Q8N1P7 616 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 PKMYT1Q99640 499 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ARID3AQ99856 593 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 UBE2TQ9NPD8 197 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ASAH2Q9NR71 780 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 TAB2Q9NYJ8 693 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 NME7Q9Y5B8 376 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 C2orf16Q68DN1 1984 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 VCANP13611 3396 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 TRIM66O15016 1216 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 RHOP08100 348 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 SP100P23497 879 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 FSHRP23945 695 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 MAGEA11P43364 429 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 MFAP3P55082 362 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 GCNT1Q02742 428 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 TRIM65Q6PJ69 517 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 RRAGAQ7L523 313 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 ENOSF1Q7L5Y1 443 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 DHX40Q8IX18 779 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 LEMD2Q8NC56 503 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 UHRF1Q96T88 793 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 CEP72Q9P209 647 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 DNMT3BQ9UBC3 853 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
CSNK1E-213ENST00000495232 FGF19O95750 216 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 CSH1P0DML2 217 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 CSH2P0DML3 217 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 MYL4P12829 197 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 ATF6P18850 670 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 SLC9A1P19634 815 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 PON1P27169 355 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 NCAPHQ15003 741 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 DDR2Q16832 855 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 TMEM270Q6UE05 265 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 ARHGEF19Q8IW93 802 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 JAKMIP2Q96AA8 810 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 CYFIP2Q96F07 1278 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 PCMTD1Q96MG8 357 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 B3GNT5Q9BYG0 378 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
CSNK1E-213ENST00000495232 CLDN5O00501 218 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 KRT5P13647 590 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 CCDC130P13994 396 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 ZNF18P17022 549 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 ADORA2BP29275 332 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 RAD23BP54727 409 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 SLC8A3P57103 927 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 NTHL1P78549 312 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 UBXN1Q04323 297 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 ZP2Q05996 745 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 ARHGAP44Q17R89 818 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
CSNK1E-213ENST00000495232 FAM35AQ86V20 835 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms