RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TCF7P36402 384 aaPredicted RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 ANP32AP39687 249 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 KCNJ5P48544 419 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 EPHA5P54756 1037 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TLE1Q04724 770 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 YWHAHQ04917 246 aaPredicted RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 IFT88Q13099 833 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TBCCQ15814 346 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TMTC4Q5T4D3 741 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 GARNL3Q5VVW2 1013 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 ANO7Q6IWH7 933 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 FOXR1Q6PIV2 292 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 SLC2A7Q6PXP3 512 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 FAM83HQ6ZRV2 1179 aaPredicted RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 NBPF5PQ86XG9 351 aaPredicted RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 SCN4BQ8IWT1 228 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 YAF2Q8IY57 180 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 RNF168Q8IYW5 571 aaPredicted RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 POMGNT2Q8NAT1 580 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 ANKRD20A12PQ8NF67 263 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 BICD2Q8TD16 824 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 DCAF11Q8TEB1 546 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 SCFD2Q8WU76 684 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 CFHR4Q92496 578 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 ATP6V0A1Q93050 837 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 Q96M66 194 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 FUZQ9BT04 418 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 THUMPD3Q9BV44 507 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 USP44Q9H0E7 712 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 PCDHAC1Q9H158 963 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 MRPL46Q9H2W6 279 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 A1CFQ9NQ94 594 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 DKK3Q9UBP4 350 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 PCDHB6Q9Y5E3 794 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.34□□□□□ -1.23
SNX13-210ENST00000494402 ELOA3CA0A087WX78 387 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 A0A087WZ62 844 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 KRT87PA6NCN2 255 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 SGSM2O43147 1006 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 NRP2O60462 931 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 SOCS5O75159 536 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 APBB3O95704 486 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 TUBB4AP04350 444 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 EPHA8P29322 1005 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 GP5P40197 560 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 BUD31P41223 144 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 KIR3DL1P43629 444 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 TARDBPQ13148 414 aaKnown RBP eCLIP7.33□□□□□ -1.24
SNX13-210ENST00000494402 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 MORF4L2Q15014 288 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 TAF2Q6P1X5 1199 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 SLC30A9Q6PML9 568 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 KIAA0408Q6ZU52 694 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 DENND5BQ6ZUT9 1274 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 CCDC186Q7Z3E2 898 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 PPP1R42Q7Z4L9 355 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 CCDC105Q8IYK2 499 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 SCML4Q8N228 414 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 SMG8Q8ND04 991 aaKnown RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 GPR156Q8NFN8 814 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 UBASH3BQ8TF42 649 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 PGAP3Q96FM1 320 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 TMX3Q96JJ7 454 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 RAB3IPQ96QF0 476 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 FOXB1Q99853 325 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 FDXACB1Q9BRP7 624 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 APOL6Q9BWW8 343 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 SMARCAD1Q9H4L7 1026 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 COQ3Q9NZJ6 369 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 MRPL15Q9P015 296 aaKnown RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 MARCH2Q9P0N8 246 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 C5AR2Q9P296 337 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 HOOK1Q9UJC3 728 aaKnown RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 FAM184BQ9ULE4 1060 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 ZMYND8Q9ULU4 1186 aaPredicted RBP7.33□□□□□ -1.24
SNX13-210ENST00000494402 DAPP1Q9UN19 280 aa7.33□□□□□ -1.24
SNX13-210ENST00000494402 ARHGAP10A1A4S6 786 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 C22orf46C9J442 243 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNX13-210ENST00000494402 DLL1O00548 723 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 TSPAN4O14817 238 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 ASAP2O43150 1006 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 EXOC3O60645 756 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 GGPS1O95749 300 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 ABHD16AO95870 558 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 TFRCP02786 760 aaKnown RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 SYPP08247 313 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 TFEBP19484 476 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 PRDX5P30044 214 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 GGT5P36269 586 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 LMAN1P49257 510 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 GSK3AP49840 483 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 SH3BGRP55822 239 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 PCBP3P57721 371 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms