RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 HTR6P50406 440 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CCT8P50990 548 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CTXN1P60606 82 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 POU6F2P78424 691 aaPredicted RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 PIGFQ07326 219 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 STRN3Q13033 797 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 MORC3Q14149 939 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 TTF1Q15361 905 aaPredicted RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 GRAMD1BQ3KR37 738 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CCDC70Q6NSX1 233 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 RSPH3Q86UC2 560 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 RHOT1Q8IXI2 618 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 FTSJ3Q8IY81 847 aaKnown RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 ZGPATQ8N5A5 531 aaKnown RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 DCBLD1Q8N8Z6 715 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 NEUROD6Q96NK8 337 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 TRMOQ9BU70 441 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 SAP30BPQ9UHR5 308 aaKnown RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 NOL7Q9UMY1 257 aaKnown RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CDYLQ9Y232 598 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 APOBEC2Q9Y235 224 aaKnown RBP2.67□□□□□ -1.98
PTPN12-212ENST00000494248 A0A087X0B3 334 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 PRRT4C9JH25 899 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 F5H697 171 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 GOLIM4O00461 696 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 TOR1BO14657 336 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 ZNF213O14771 459 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 DHX16O60231 1041 aaKnown RBP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 JTBO76095 146 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 MYL3P08590 195 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 NR2F6P10588 404 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 ATF3P18847 181 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 TNFRSF1BP20333 461 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 ID4P47928 161 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 MC2RQ01718 297 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 GLIPR1L2Q4G1C9 344 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 ALFQ53S48 1182 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 C10orf62Q5T681 223 aaPredicted RBP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 UBAP2Q5T6F2 1119 aaKnown RBP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 PXDC1Q5TGL8 231 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 PRAMEF17Q5VTA0 474 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 CEP85Q6P2H3 762 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 CREBRFQ8IUR6 639 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 SMAP1Q8IYB5 467 aaPredicted RBP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 MYO1HQ8N1T3 1032 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 CCDC89Q8N998 374 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 IL17RDQ8NFM7 739 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 MYRIPQ8NFW9 859 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 TBC1D5Q92609 795 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 ZNF622Q969S3 477 aaKnown RBP eCLIP2.66□□□□□ -1.983e-6■□□□□ 9.4
PTPN12-212ENST00000494248 AHCYL2Q96HN2 611 aaKnown RBP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 TTC14Q96N46 770 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 KLHL32Q96NJ5 620 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 AS3MTQ9HBK9 375 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 PDGFCQ9NRA1 345 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 SERTAD4Q9NUC0 356 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 INTUQ9ULD6 942 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.66□□□□□ -1.98
PTPN12-212ENST00000494248 SPATA31A3Q5VYP0 1347 aa2.66□□□□□ -1.98
PTPN12-212ENST00000494248 CLGNO14967 610 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SMAD6O43541 496 aaKnown RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 RNASEH2AO75792 299 aaKnown RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SCGB1D2O95969 90 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 RHOP08100 348 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 HSP90AB1P08238 724 aaKnown RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 NDUFB7P17568 137 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CNGA1P29973 690 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 ALDH9A1P49189 494 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CDKN1CP49918 316 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SRSF2Q01130 221 aaKnown RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 BMPR2Q13873 1038 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SIM2Q14190 667 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 PABPC1LQ4VXU2 614 aaKnown RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CCDC184Q52MB2 194 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CT47A1Q5JQC4 288 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 TTLL5Q6EMB2 1281 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 KRT77Q7Z794 578 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 TMPRSS12Q86WS5 348 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CMIPQ8IY22 773 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CPXCR1Q8N123 301 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CFAP52Q8N1V2 620 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 NANOGP1Q8N7R0 232 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SLC17A8Q8NDX2 589 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 OR2I1PQ8NGU4 316 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 DPF2Q92785 391 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 CAMK1GQ96NX5 476 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 OSBPL9Q96SU4 736 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SMOQ99835 787 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 PACSIN1Q9BY11 444 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 TPSD1Q9BZJ3 242 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 IMPG2Q9BZV3 1241 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 TDP1Q9NUW8 608 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 JKAMPQ9P055 326 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 SH3BP4Q9P0V3 963 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 POLG2Q9UHN1 485 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 FEZ2Q9UHY8 353 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-212ENST00000494248 MCM8Q9UJA3 840 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 ASAP1Q9ULH1 1129 aa2.65□□□□□ -1.99
PTPN12-212ENST00000494248 A0A0B4J269 797 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms