RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 L1RE1Q9UN81 338 aa6.48□□□□□ -1.37
CPSF7-213ENST00000494016 STXBP5LQ9Y2K9 1186 aa6.48□□□□□ -1.37
CPSF7-213ENST00000494016 DAAM1Q9Y4D1 1078 aa6.48□□□□□ -1.37
CPSF7-213ENST00000494016 ATP8B3O60423 1300 aa6.48□□□□□ -1.37
CPSF7-213ENST00000494016 GRID2IPA4D2P6 1211 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CCDC151A5D8V7 595 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 F8VZ95 297 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 GREM1O60565 184 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 TUBBP07437 444 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 H2AFZP0C0S5 128 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 TCP1P17987 556 aaKnown RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 GCLMP48507 274 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 MYL7Q01449 175 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ITIH3Q06033 890 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CKAP4Q07065 602 aaKnown RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 KIF22Q14807 665 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ARHGAP44Q17R89 818 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 XKR3Q5GH77 459 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 WDR93Q6P2C0 686 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 NFRKBQ6P4R8 1299 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 FBXL19Q6PCT2 694 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CCNI2Q6ZMN8 369 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 GADL1Q6ZQY3 521 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 SEPT14Q6ZU15 432 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 H2AFVQ71UI9 128 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 SLFN11Q7Z7L1 901 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ERO1BQ86YB8 467 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CBWD2Q8IUF1 395 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ARHGEF19Q8IW93 802 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 LRRC57Q8N9N7 239 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 SPATA4Q8NEY3 305 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 PARD3BQ8TEW8 1205 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 U2AF1L4Q8WU68 220 aaKnown RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 DHX38Q92620 1227 aaKnown RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 KCNN1Q92952 543 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ATP6V0A1Q93050 837 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 MS4A14Q96JA4 679 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 RPGRIP1Q96KN7 1286 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 FGD4Q96M96 766 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ALS2CR12Q96Q35 445 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 KIFC3Q9BVG8 833 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 TMEM117Q9H0C3 514 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 DHX33Q9H6R0 707 aaKnown RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ARFGAP3Q9NP61 516 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 UBE2TQ9NPD8 197 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-213ENST00000494016 EHD2Q9NZN4 543 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 FBXO40Q9UH90 709 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 EXOC7Q9UPT5 735 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 COQ4Q9Y3A0 265 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 HYOU1Q9Y4L1 999 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 CASP8AP2Q9UKL3 1982 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 ADGRA3Q8IWK6 1321 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 IGSF9BQ9UPX0 1349 aa6.47□□□□□ -1.37
CPSF7-213ENST00000494016 DNAJC25-GNG10A0A024R161 153 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 A0A0A6YYK5 440 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 TARSL2A2RTX5 802 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 FAM170BA6NMN3 283 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 LRRIQ3A6PVS8 624 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 FAM155AB1AL88 458 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 N4BP1O75113 896 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 PPFIA4O75335 1185 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 BPNT1O95861 308 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 FTCDO95954 541 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 CHRNB2P17787 502 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 TNFAIP3P21580 790 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 GRK4P32298 578 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 CXCR5P32302 372 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 GALCP54803 685 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 NAP1L1P55209 391 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 HUNKP57058 714 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 PRKCEQ02156 737 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 SP4Q02446 784 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 ENPEPQ07075 957 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 CYP24A1Q07973 514 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 C2orf54Q08AI8 447 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 PPIL2Q13356 520 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 PRPF4BQ13523 1007 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 MPP2Q14168 576 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 TARBP2Q15633 366 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 SNRNP35Q16560 246 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 BRDTQ58F21 947 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 OGFOD3Q6PK18 319 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 KRT222Q8N1A0 295 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 MCPH1Q8NEM0 835 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 ZNF296Q8WUU4 475 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 KAT5Q92993 513 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 TMEM143Q96AN5 459 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 SAAL1Q96ER3 474 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 KREMEN1Q96MU8 473 aa6.46□□□□□ -1.38
CPSF7-213ENST00000494016 CCDC43Q96MW1 224 aaKnown RBP6.46□□□□□ -1.38
CPSF7-213ENST00000494016 PCDHB18PQ96TA0 734 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms