RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	CDH22	Q9UJ99	828 aa		10.64	□□□□□ -0.71
MACF1-222	ENST00000494012	NCOR1	O75376	2440 aa		10.64	□□□□□ -0.71
MACF1-222	ENST00000494012	OBSL1	O75147	1896 aa		10.64	□□□□□ -0.71
MACF1-222	ENST00000494012	GREB1	Q4ZG55	1949 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	SMTNL1	A8MU46	457 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	PES1	O00541	588 aa	Known RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ZNF197	O14709	1029 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	TRIM66	O15016	1216 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	LRRN2	O75325	713 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ATF6	P18850	670 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	COL9A1	P20849	921 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	CYP2F1	P24903	491 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ANXA13	P27216	316 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	SSTR3	P32745	418 aa	Predicted RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ZNF165	P49910	485 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	GCNT1	Q02742	428 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	LRMP	Q12912	555 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	NFKBIB	Q15653	356 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	TAF12	Q16514	161 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ZSCAN23	Q3MJ62	389 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	VWA3B	Q502W6	1294 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	TRIM65	Q6PJ69	517 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	GBP6	Q6ZN66	633 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	PDZD4	Q76G19	769 aa	Predicted RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	GET4	Q7L5D6	327 aa	Predicted RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ENOSF1	Q7L5Y1	443 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ACOT1	Q86TX2	421 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	CRYBG2	Q8N1P7	616 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	PLCD3	Q8N3E9	789 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	PPM1K	Q8N3J5	372 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	AOPEP	Q8N6M6	819 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	EHBP1	Q8NDI1	1231 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	LMO3	Q8TAP4	145 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	JAKMIP2	Q96AA8	810 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	RPGRIP1	Q96KN7	1286 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ARID3A	Q99856	593 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	CORO1B	Q9BR76	489 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	FUCA2	Q9BTY2	467 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	AVEN	Q9NQS1	362 aa	Predicted RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	FANCL	Q9NW38	375 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	HCFC1R1	Q9NWW0	138 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	EHD2	Q9NZN4	543 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	CEP72	Q9P209	647 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	DNMT3B	Q9UBC3	853 aa	Known RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	HMGXB4	Q9UGU5	601 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	RAPGEFL1	Q9UHV5	662 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	NME7	Q9Y5B8	376 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	NOTCH4	Q99466	2003 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	BDP1	A6H8Y1	2624 aa		10.63	□□□□□ -0.71
MACF1-222	ENST00000494012	DOCK8	Q8NF50	2099 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	DOCK6	Q96HP0	2047 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	C19orf67	A6NJJ6	358 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	BECN2	A8MW95	431 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	LOC730098	B7Z3J9	87 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	SOAT2	O75908	522 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	MICAL2	O94851	1124 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	RHO	P08100	348 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	CDK11B	P21127	795 aa	Known RBP	10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	GBP2	P32456	591 aa	Predicted RBP	10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	GRIK1	P39086	918 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	EPHA5	P54756	1037 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	EXOC3L4	Q17RC7	722 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	CCDC142	Q17RM4	750 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	MIIP	Q5JXC2	388 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	FKBP15	Q5T1M5	1219 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	SMYD5	Q6GMV2	418 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	SCN4B	Q8IWT1	228 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	GJD3	Q8N144	294 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	FEZF2	Q8TBJ5	459 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	TATDN2	Q93075	761 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	SMARCD1	Q96GM5	515 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	GCNA	Q96QF7	691 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	MED10	Q9BTT4	135 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	MRPS23	Q9Y3D9	190 aa	Known RBP	10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	DENND4C	Q5VZ89	1909 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	TTC28	Q96AY4	2481 aa		10.62	□□□□□ -0.71
MACF1-222	ENST00000494012	MUC3A	Q02505	3323 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	ZNF638	Q14966	1978 aa	Known RBP	10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	CSH1	P0DML2	217 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	CSH2	P0DML3	217 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	ZNF18	P17022	549 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	RFX1	P22670	979 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	SP100	P23497	879 aa	Predicted RBP	10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	BDNF	P23560	247 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	CDR1	P51861	262 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	MFAP3	P55082	362 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	TPM4	P67936	248 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	NTHL1	P78549	312 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	ORC1	Q13415	861 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	NCAPH	Q15003	741 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	KRT31	Q15323	416 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	DDR2	Q16832	855 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	ZNF394	Q53GI3	561 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	FAM35A	Q86V20	835 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	ZDHHC14	Q8IZN3	488 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	SLC2A14	Q8TDB8	520 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	WHAMM	Q8TF30	809 aa		10.61	□□□□□ -0.71
MACF1-222	ENST00000494012	TRMT2B	Q96GJ1	504 aa	Known RBP	10.61	□□□□□ -0.71

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