RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ZNF518BQ9C0D4 1074 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 ACP6Q9NPH0 428 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 INSL5Q9Y5Q6 135 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 CCL16O15467 120 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 POLR2FP61218 127 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 TWF1Q12792 350 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 SDHAF4Q5VUM1 108 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 PAQR9Q6ZVX9 377 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 TTC39CQ8N584 583 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 RBBP8NLQ8NC74 664 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 STKLD1Q8NE28 680 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 SLC2A14Q8TDB8 520 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 ANP32EQ9BTT0 268 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 MED10Q9BTT4 135 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 NAA15Q9BXJ9 866 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 XPO4Q9C0E2 1151 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 NLRC4Q9NPP4 1024 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 PLCB1Q9NQ66 1216 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 TMEM30AQ9NV96 361 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 DZANK1Q9NVP4 752 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 YIPF1Q9Y548 306 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 FOXN3O00409 490 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 AP5Z1O43299 807 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 C1RP00736 705 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 ADORA2BP29275 332 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 CACNA2D1P54289 1103 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 MAPRE1Q15691 268 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 DDR2Q16832 855 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 C4orf50Q6ZRC1 276 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 CCDC149Q6ZUS6 474 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 ENOSF1Q7L5Y1 443 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 FUKQ8N0W3 1084 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 SPPL2BQ8TCT7 592 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 GPR88Q9GZN0 384 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 SFXN1Q9H9B4 322 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 DPP7Q9UHL4 492 aa19.01■□□□□ 0.63
PDLIM7-208ENST00000493815 HAPLN1P10915 354 aaPredicted RBP19■□□□□ 0.63
PDLIM7-208ENST00000493815 CD19P15391 556 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 SSTR3P32745 418 aaPredicted RBP19■□□□□ 0.63
PDLIM7-208ENST00000493815 SMARCB1Q12824 385 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 DRAP1Q14919 205 aaPredicted RBP19■□□□□ 0.63
PDLIM7-208ENST00000493815 CFAP221Q4G0U5 840 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 PPP1R26Q5T8A7 1209 aaPredicted RBP19■□□□□ 0.63
PDLIM7-208ENST00000493815 SCN4BQ8IWT1 228 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 NEK11Q8NG66 645 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 HDAC7Q8WUI4 952 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 SHC3Q92529 594 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 ZNF707Q96C28 371 aaPredicted RBP19■□□□□ 0.63
PDLIM7-208ENST00000493815 CYFIP2Q96F07 1278 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 S1PR5Q9H228 398 aa19■□□□□ 0.63
PDLIM7-208ENST00000493815 ATF6P18850 670 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 ZNF132P52740 706 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 UVSSAQ2YD98 709 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 ELMSAN1Q6PJG2 1045 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 FAM35AQ86V20 835 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 GIPC2Q8TF65 315 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 C2orf15Q8WU43 125 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 TFAP2BQ92481 460 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 FAM124BQ9H5Z6 455 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 ABCB6Q9NP58 842 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 CD207Q9UJ71 328 aa18.99■□□□□ 0.63
PDLIM7-208ENST00000493815 CYP26A1O43174 497 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 LRG1P02750 347 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 HOXB8P17481 243 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 BRD2P25440 801 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 GRIK1P39086 918 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 ALDH1A3P47895 512 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 SMRP1Q8NCR6 262 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 JAKMIP2Q96AA8 810 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 FUBP3Q96I24 572 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 FAM81BQ96LP2 452 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 ZSWIM1Q9BR11 485 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 PRKD2Q9BZL6 878 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 KRT82Q9NSB4 513 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 HCFC1R1Q9NWW0 138 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 ZDHHC7Q9NXF8 308 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 CEP72Q9P209 647 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 MAFFQ9ULX9 164 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 CNTN6Q9UQ52 1028 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 BEST1O76090 585 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 TUFMP49411 452 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 SMG7Q92540 1137 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 KCNK16Q96T55 309 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 STK33Q9BYT3 514 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 ADAM7Q9H2U9 754 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 COG5Q9UP83 839 aa18.98■□□□□ 0.63
PDLIM7-208ENST00000493815 A0A1W2PQC6 194 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 GRXCR2A6NFK2 248 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 F8VP50 259 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 F8VZ95 297 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 AP1G2O75843 785 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 TRIM21P19474 475 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 PBX1P40424 430 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 HNRNPABQ99729 332 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 PIDD1Q9HB75 910 aa18.97■□□□□ 0.63
PDLIM7-208ENST00000493815 PAEPP09466 180 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 HNRNPA1P09651 372 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 RFX1P22670 979 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 HOXA9P31269 272 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms