RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 VPS53Q5VIR6 699 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 DGKHQ86XP1 1220 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 TOR1AIP2Q8NFQ8 470 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 ATRIPQ8WXE1 791 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 LRTOMTQ8WZ04 291 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 NELL1Q92832 810 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 TRIM43Q96BQ3 446 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-216ENST00000493758 SARAFQ96BY9 339 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 ZG16BQ96DA0 208 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 UROC1Q96N76 676 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 BBC3Q96PG8 261 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-216ENST00000493758 BTBD1Q9H0C5 482 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 SEMA4GQ9NTN9 838 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 DDX20Q9UHI6 824 aaKnown RBP5.36□□□□□ -1.55
ITGB1-216ENST00000493758 TMX2Q9Y320 296 aa5.36□□□□□ -1.55
ITGB1-216ENST00000493758 TLR5O60602 858 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 RHOP08100 348 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 ITPKBP27987 946 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 SATB1Q01826 763 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 SLC44A4Q53GD3 710 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 STRIP1Q5VSL9 837 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 LAYNQ6UX15 382 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 COL23A1Q86Y22 540 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-216ENST00000493758 ADGRG3Q86Y34 549 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 FMNL3Q8IVF7 1028 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 KRT78Q8N1N4 520 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 DNAJC5GQ8N7S2 189 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 PCSK9Q8NBP7 692 aaKnown RBP5.35□□□□□ -1.55
ITGB1-216ENST00000493758 C8orf48Q96LL4 319 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 TTYH3Q9C0H2 523 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 R3HDMLQ9H3Y0 253 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 RIOX1Q9H6W3 641 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 SERHLQ9NQF3 203 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 XPNPEP3Q9NQH7 507 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.55
ITGB1-216ENST00000493758 AFF4Q9UHB7 1163 aaKnown RBP5.35□□□□□ -1.55
ITGB1-216ENST00000493758 ZNHIT2Q9UHR6 403 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 TPCN1Q9ULQ1 816 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 SSX2IPQ9Y2D8 614 aa5.35□□□□□ -1.55
ITGB1-216ENST00000493758 MYO1CO00159 1063 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 C1QL1O75973 258 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 ONECUT2O95948 504 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 MYBP10242 640 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 KITP10721 976 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 ATF3P18847 181 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 KLRC1P26715 233 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 SLC7A1P30825 629 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 ELLP55199 621 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-216ENST00000493758 LILRA4P59901 499 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 SLC13A2Q13183 592 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 BMPR2Q13873 1038 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 DARS2Q6PI48 645 aaKnown RBP5.34□□□□□ -1.55
ITGB1-216ENST00000493758 TSHZ1Q6ZSZ6 1077 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 FAM156AQ8NDB6 213 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 TFAP2BQ92481 460 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 TTC17Q96AE7 1141 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 APIPQ96GX9 242 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 PCGF6Q9BYE7 350 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 LRRC27Q9C0I9 530 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 STK32BQ9NY57 414 aa5.34□□□□□ -1.55
ITGB1-216ENST00000493758 FRMPD2Q68DX3 1309 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CFAP69A5D8W1 941 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 LINC00473A8K010 186 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 SLC16A3O15427 465 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CCP110O43303 1012 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 TJP3O95049 919 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 NUDT3O95989 172 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CSF1RP07333 972 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CHRM2P08172 466 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ELFN1P0C7U0 828 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 MYF5P13349 255 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ATXN1P54253 815 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 MYO1EQ12965 1108 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CTBP1Q13363 440 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 SEMA5AQ13591 1074 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 HLTFQ14527 1009 aaKnown RBP eCLIP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 MGAT5BQ3V5L5 792 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 PLAC9Q5JTB6 97 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 RNF220Q5VTB9 566 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF551Q7Z340 670 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 DNAJC10Q8IXB1 793 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 FBXO41Q8TF61 875 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ATG4AQ8WYN0 398 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF764Q96H86 408 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ZC3H10Q96K80 434 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 BHMT2Q9H2M3 363 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 SERTAD4Q9NUC0 356 aa5.33□□□□□ -1.56
ITGB1-216ENST00000493758 ARPP21Q9UBL0 812 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 NDRG4Q9ULP0 352 aaKnown RBP5.33□□□□□ -1.56
ITGB1-216ENST00000493758 FOXN3O00409 490 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-216ENST00000493758 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 ZFXP17010 805 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-216ENST00000493758 DRD4P21917 467 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 PEX2P28328 305 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 PLA2G5P39877 138 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 PDE6CP51160 858 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms