RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
NFIA-213ENST00000493627 TCHHQ07283 1943 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 K7ELQ4 463 aaPredicted RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 TGM1P22735 817 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 CYP2F1P24903 491 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 PCSK1P29120 753 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 LHX1P48742 406 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 RPL10AP62906 217 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 SRSF5Q13243 272 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 SIM2Q14190 667 aaPredicted RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 E2F4Q16254 413 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 DDR2Q16832 855 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 CFAP221Q4G0U5 840 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 HEATR6Q6AI08 1181 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 MON1AQ86VX9 555 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 LONP2Q86WA8 852 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 CBWD2Q8IUF1 395 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 SPATA2LQ8IUW3 424 aaPredicted RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 SYNPOQ8N3V7 929 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 OR5B17Q8NGF7 314 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 TRMT2BQ96GJ1 504 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 ANKRD36BP1Q96IX9 119 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 FAM83CQ9BQN1 747 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 TRIM9Q9C026 710 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 EBF3Q9H4W6 596 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 PARD6AQ9NPB6 346 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 HPS4Q9NQG7 708 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 GKN1Q9NS71 199 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 INTS13Q9NVM9 706 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 C2orf42Q9NWW7 574 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 GTF3C4Q9UKN8 822 aa9.78□□□□□ -0.84
NFIA-213ENST00000493627 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
NFIA-213ENST00000493627 OTOL1A6NHN0 477 aaPredicted RBP9.77□□□□□ -0.85
NFIA-213ENST00000493627 ZNF233A6NK53 670 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 PRR5-ARHGAP8B1AHC4 643 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 GABRDO14764 452 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SPTLC2O15270 562 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 EIF3DO15371 548 aaKnown RBP eCLIP9.77□□□□□ -0.85
NFIA-213ENST00000493627 PPP6R2O75170 966 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 TNNC2P02585 160 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 CKMP06732 381 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 RETP07949 1114 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 ARSAP15289 507 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SDHBP21912 280 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 CNR2P34972 360 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 PSMC1P62191 440 aaKnown RBP9.77□□□□□ -0.85
NFIA-213ENST00000493627 ASIC1P78348 528 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 ARHGAP8P85298 464 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 FAM160A1Q05DH4 1040 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 RUNX3Q13761 415 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 ZNF268Q14587 947 aaPredicted RBP9.77□□□□□ -0.85
NFIA-213ENST00000493627 MTF1Q14872 753 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SURF1Q15526 300 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SOWAHAQ2M3V2 549 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 FAM26FQ5R3K3 315 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 CC2D1AQ6P1N0 951 aaPredicted RBP9.77□□□□□ -0.85
NFIA-213ENST00000493627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.77□□□□□ -0.85
NFIA-213ENST00000493627 WDR49Q8IV35 697 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SCN4BQ8IWT1 228 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 MYLPFQ96A32 169 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 DHX58Q96C10 678 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 CHFRQ96EP1 664 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 FUBP3Q96I24 572 aaKnown RBP eCLIP9.77□□□□□ -0.85
NFIA-213ENST00000493627 HPDLQ96IR7 371 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 MYRFLQ96LU7 910 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 SYT15Q9BQS2 421 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 LRRC27Q9C0I9 530 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 TRPC7Q9HCX4 862 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 TDP1Q9NUW8 608 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 KBTBD4Q9NVX7 518 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 HSPBP1Q9NZL4 362 aa9.77□□□□□ -0.85
NFIA-213ENST00000493627 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 HRO43593 1189 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 LRP3O75074 770 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 YEATS4O95619 227 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 HOXA6P31267 233 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 HOXC13P31276 330 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 HOXD13P35453 343 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 MAGEA11P43364 429 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 AMPD3Q01432 767 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 GRSF1Q12849 480 aaKnown RBP eCLIP9.76□□□□□ -0.85
NFIA-213ENST00000493627 USP4Q13107 963 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
NFIA-213ENST00000493627 PDGFRLQ15198 375 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 ZNF77Q15935 545 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
NFIA-213ENST00000493627 DUOXA2Q1HG44 320 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 TMEM196Q5HYL7 178 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 FSTL4Q6MZW2 842 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 PKN3Q6P5Z2 889 aa9.76□□□□□ -0.85
NFIA-213ENST00000493627 C4orf50Q6ZRC1 276 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms