RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 EDEM2Q9BV94 578 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 ZCWPW1Q9H0M4 648 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 HELZP42694 1942 aaKnown RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 LNP1A1A4G5 178 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 BCLAF3A2AJT9 711 aaKnown RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 C4orf47A7E2U8 309 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 CAVIN2O95810 425 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TOP3BO95985 862 aaKnown RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 F11P03951 625 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 CYP11A1P05108 521 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 PLS3P13797 630 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 HMGA1P17096 107 aaKnown RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TRAPPC10P48553 1259 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TUFMP49411 452 aaKnown RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 GALK1P51570 392 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 SPATA1Q5VX52 437 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 ARMCX5Q6P1M9 558 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 LRRTM3Q86VH5 581 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TSC1Q92574 1164 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 KCNN1Q92952 543 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 SEPT5Q99719 369 aaPredicted RBP14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 EBF1Q9UH73 591 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 TBX20Q9UMR3 447 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 FREM2Q5SZK8 3169 aa14.16□□□□□ -0.14
HDAC3-213ENST00000492506 PIRO00625 290 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ODC1P11926 461 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ARSAP15289 507 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 SPINK2P20155 84 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 DRD1P21728 446 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 NMT1P30419 496 aaKnown RBP14.15□□□□□ -0.14
HDAC3-213ENST00000492506 UBE2HP62256 183 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 CREB5Q02930 508 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 RAD51AP2Q09MP3 1159 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 MGAT5BQ3V5L5 792 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 SLC39A12Q504Y0 691 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 SYT13Q7L8C5 426 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 GIPC2Q8TF65 315 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 TSPAN18Q96SJ8 248 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 TDP1Q9NUW8 608 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ARGLU1Q9NWB6 273 aaPredicted RBP14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 ZDHHC9Q9Y397 364 aa14.15□□□□□ -0.14
HDAC3-213ENST00000492506 CEP192Q8TEP8 1941 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 PLXND1Q9Y4D7 1925 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 ANO9A1A5B4 782 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 CDX4O14627 284 aaPredicted RBP14.14□□□□□ -0.15
HDAC3-213ENST00000492506 XPOTO43592 962 aaKnown RBP14.14□□□□□ -0.15
HDAC3-213ENST00000492506 RHOBTB1O94844 696 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 TPM1P09493 284 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 HAPLN1P10915 354 aaPredicted RBP14.14□□□□□ -0.15
HDAC3-213ENST00000492506 CDC25BP30305 580 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 GJA4P35212 333 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 SMTNP53814 917 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 NCKAP1LP55160 1127 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 NLRP12P59046 1061 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 FOXC1Q12948 553 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 VEPH1Q14D04 833 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 ELF2Q15723 593 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 SH3PXD2AQ5TCZ1 1133 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 KRT79Q5XKE5 535 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 JADE1Q6IE81 842 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 MAB21L3Q8N8X9 362 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 RPLP0P6Q8NHW5 317 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 GATA6Q92908 595 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 PNMA5Q96PV4 448 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 GCNAQ96QF7 691 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 P2RY13Q9BPV8 354 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 NCAPGQ9BPX3 1015 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 RAB34Q9BZG1 259 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 KCNG1Q9UIX4 513 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 GON4LQ3T8J9 2241 aa14.14□□□□□ -0.15
HDAC3-213ENST00000492506 CACNA1EQ15878 2313 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 SOBPA7XYQ1 873 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 APBB3O95704 486 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 TNNT1P13805 278 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 PAX3P23760 479 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 AVPR1AP37288 418 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 MATR3P43243 847 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC3-213ENST00000492506 GTF2A1P52655 376 aaPredicted RBP14.13□□□□□ -0.15
HDAC3-213ENST00000492506 SLC12A3P55017 1021 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 DMC1Q14565 340 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 KARSQ15046 597 aaKnown RBP14.13□□□□□ -0.15
HDAC3-213ENST00000492506 KYAT1Q16773 422 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 FBXO43Q4G163 708 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 HYIQ5T013 277 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 TXNDC8Q6A555 127 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 MON1AQ86VX9 555 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 SYT2Q8N9I0 419 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms