RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GTSE1Q9NYZ3 720 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 CGNQ9P2M7 1197 aaKnown RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 GTF3C4Q9UKN8 822 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 NDRG2Q9UN36 371 aaKnown RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 SNX9Q9Y5X1 595 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 HELZP42694 1942 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM237AA0A1B0GTK4 181 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 OTOL1A6NHN0 477 aaPredicted RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 K7ESF4 209 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 TRDMT1O14717 391 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 POLR2DO15514 142 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 KLRC4O43908 158 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CST3P01034 146 aaPredicted RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 PFKLP17858 780 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 LMO2P25791 158 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CXCL12P48061 93 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 GPR15P49685 360 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CCR3P51677 355 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CYP4F8P98187 520 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CYP24A1Q07973 514 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 BFSP1Q12934 665 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 MYO1EQ12965 1108 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 PKP1Q13835 747 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 SNRNP35Q16560 246 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 DDR2Q16832 855 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 KNOP1Q1ED39 458 aaKnown RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 ITPRIPL2Q3MIP1 535 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 TMEM196Q5HYL7 178 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 TSSK4Q6SA08 328 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 VSTM1Q6UX27 236 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 TRAPPC11Q7Z392 1133 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 YAF2Q8IY57 180 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 ADGRF2Q8IZF7 708 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 RIN3Q8TB24 985 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CSGALNACT1Q8TDX6 532 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF516Q92618 1163 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 ANKRD36BP1Q96IX9 119 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 ZFYVE19Q96K21 471 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 XYLT2Q9H1B5 865 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 KIF9Q9HAQ2 790 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CRTAC1Q9NQ79 661 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 HPS4Q9NQG7 708 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 GKN1Q9NS71 199 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 TDP1Q9NUW8 608 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 DMAC2Q9NW81 257 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 GCNT4Q9P109 453 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 UXTQ9UBK9 157 aaPredicted RBP8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CDH9Q9ULB4 789 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 CCL26Q9Y258 94 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 NME7Q9Y5B8 376 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 SDK1Q7Z5N4 2213 aa8.98□□□□□ -0.97
SMARCB1-207ENST00000491967 RALGAPA1Q6GYQ0 2036 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SPTBN2O15020 2390 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SLC38A8A6NNN8 435 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 DPYSL4O14531 572 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 HCRTO43612 131 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 ACTN4O43707 911 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 ATP2C2O75185 946 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 TNNC2P02585 160 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 KRT19P08727 400 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 TMEM191BP0C7N4 346 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SLFN14P0C7P3 912 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 ACAT1P24752 427 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 ID4P47928 161 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SOX9P48436 509 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 CDR1P51861 262 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 KPNA1P52294 538 aaPredicted RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 ASIC1P78348 528 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SATB1Q01826 763 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 TNK2Q07912 1038 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 RUNX3Q13761 415 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 LRRC32Q14392 662 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 PPP2R5DQ14738 602 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 CCDC142Q17RM4 750 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SDHAF4Q5VUM1 108 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 LMBRD2Q68DH5 695 aaPredicted RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 TXNDC8Q6A555 127 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 DCLK2Q8N568 766 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 GPR161Q8N6U8 529 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 MAB21L3Q8N8X9 362 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 XXYLT1Q8NBI6 393 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 MYCBPAPQ8TBZ2 947 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM200AQ8TCP9 573 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 RMDN1Q96DB5 314 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 GCNAQ96QF7 691 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SLC22A12Q96S37 553 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 TTLL2Q9BWV7 592 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 SMG9Q9H0W8 520 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 C2orf42Q9NWW7 574 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 THG1LQ9NWX6 298 aaKnown RBP8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 CFAP45Q9UL16 551 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 HPSEQ9Y251 543 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 MYO16Q9Y6X6 1858 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 NCOR2Q9Y618 2525 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms