RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 SMG9Q9H0W8 520 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 RPF1Q9H9Y2 349 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 ABCA7Q8IZY2 2146 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 OBSL1O75147 1896 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 TCHHQ07283 1943 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 OTOL1A6NHN0 477 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ENO4A6NNW6 628 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 TNFRSF10BO14763 440 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 F11P03951 625 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 HAPLN1P10915 354 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 PLS3P13797 630 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ARSAP15289 507 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ATF6P18850 670 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 GUCY2CP25092 1073 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 HOXD12P35452 270 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 TRAPPC10P48553 1259 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ATXN3P54252 364 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 NLRP12P59046 1061 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 CFHR1Q03591 330 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 MTF1Q14872 753 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ZNF174Q15697 407 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ECM1Q16610 540 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ZNF423Q2M1K9 1284 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 RINT1Q6NUQ1 792 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 SYT12Q8IV01 421 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 HDDC3Q8N4P3 179 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 CHFRQ96EP1 664 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 TMEM206Q9H813 350 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 KCNK4Q9NYG8 393 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 NOL7Q9UMY1 257 aaKnown RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 SRPK3Q9UPE1 567 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 DERAQ9Y315 318 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 URB1O60287 2271 aaKnown RBP12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 TSC2P49815 1807 aa12.04□□□□□ -0.48
CLCNKA-206ENST00000491433 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 LACTBL1A8MY62 500 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 WISP1O95388 367 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 NFATC1O95644 943 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 ADRB2P07550 413 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 USP17L7P0C7H9 530 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 ABCG1P45844 678 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 PDE6CP51160 858 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 MRPS21P82921 87 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 SPAG1Q07617 926 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 MAPK7Q13164 816 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 NFE2Q16621 373 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 HSF5Q4G112 596 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 SLC23A3Q6PIS1 610 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 RAB44Q7Z6P3 723 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 FSIP1Q8NA03 581 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 CEP76Q8TAP6 659 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 KCND2Q9NZV8 630 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 LARSQ9P2J5 1176 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 MMP17Q9ULZ9 603 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 ANK1P16157 1881 aa12.03□□□□□ -0.48
CLCNKA-206ENST00000491433 A0A087WV48 116 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 TRAV19A0A0A6YYK7 116 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 PATE3B3GLJ2 98 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 E9PMD0 336 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 OGTO15294 1046 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 ABCD1P33897 745 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 TAF6P49848 677 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 LIG4P49917 911 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 ANAPC15P60006 121 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 RPL10AP62906 217 aaKnown RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 TSPY1Q01534 308 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 TXNDC8Q6A555 127 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 ANO7Q6IWH7 933 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 PIP4P1Q86T03 277 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 TMEM150AQ86TG1 271 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 IGSF22Q8N9C0 903 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 OR10T2Q8NGX3 314 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 USP33Q8TEY7 942 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 KCNN1Q92952 543 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms