RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 WARSP23381 471 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 CYP2F1P24903 491 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 TARSP26639 723 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 PPP3CCP48454 512 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 CYP27A1Q02318 531 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 EHHADHQ08426 723 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 DDR2Q16832 855 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 KMT5BQ4FZB7 885 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 DGKKQ5KSL6 1271 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 CCDC150Q8NCX0 1101 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 IMPG2Q9BZV3 1241 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 TDP1Q9NUW8 608 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 HOOK1Q9UJC3 728 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 KMT2EQ8IZD2 1858 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 A8MXQ7 604 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 TACC1O75410 805 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 STAU1O95793 577 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 CCNE1P24864 410 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 CASP1P29466 404 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 HOXD13P35453 343 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 CCR3P51677 355 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 WNT7BP56706 349 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 NLRP12P59046 1061 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 CYP4F8P98187 520 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 ZNF667Q5HYK9 610 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 MON1AQ86VX9 555 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 SLC9A9Q8IVB4 645 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 MAB21L3Q8N8X9 362 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 TRMT2BQ96GJ1 504 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 TNIP3Q96KP6 325 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 LMAN1LQ9HAT1 526 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 NXF1Q9UBU9 619 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 PCDHGA2Q9Y5H1 932 aa17.7■□□□□ 0.42
PDLIM2-217ENST00000491330 DOCK8Q8NF50 2099 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TRAV19A0A0A6YYK7 116 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 SLC38A8A6NNN8 435 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 ACTN4O43707 911 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 KRT13P13646 458 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 CDR1P51861 262 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 NR1H3Q13133 447 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 KCNB1Q14721 858 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 ZNF699Q32M78 642 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 ITPRIPL2Q3MIP1 535 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 STXBP5Q5T5C0 1151 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TMEM174Q8WUU8 243 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TAF4BQ92750 862 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 SLC46A2Q9BY10 475 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TRPC7Q9HCX4 862 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TMLHEQ9NVH6 421 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 TRPM5Q9NZQ8 1165 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 RAB23Q9ULC3 237 aa17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-217ENST00000491330 MYBPHLA2RUH7 354 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 NOL4O94818 638 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 F11P03951 625 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 CKMP06732 381 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 PFKLP17858 780 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 STK4Q13043 487 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 PDGFRLQ15198 375 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 SGSM1Q2NKQ1 1148 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 TDRD10Q5VZ19 366 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 CEP135Q66GS9 1140 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 FAM171BQ6P995 826 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 DENND5BQ6ZUT9 1274 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 ADSSL1Q8N142 457 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 SYNPOQ8N3V7 929 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 CXorf38Q8TB03 319 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 SPATA17Q96L03 361 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 MYRFLQ96LU7 910 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 ELOVL4Q9GZR5 314 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 ZSCAN32Q9NX65 697 aa17.68■□□□□ 0.42
PDLIM2-217ENST00000491330 SPECC1L-ADORA2AF8WAN1 911 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 IKBKBO14920 756 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 LRRN2O75325 713 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 CST3P01034 146 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 NR3C1P04150 777 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 HMGA1P17096 107 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 PTPN1P18031 435 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 CXCL12P48061 93 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 GRSF1Q12849 480 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 ZNF268Q14587 947 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 MAMSTRQ6ZN01 415 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 GPIHBP1Q8IV16 184 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 TMC2Q8TDI7 906 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 SLITRK1Q96PX8 696 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 CHRDQ9H2X0 955 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 IL21Q9HBE4 155 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 GKN1Q9NS71 199 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 R4GN57 208 aa17.67■□□□□ 0.42
PDLIM2-217ENST00000491330 STX10O60499 249 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 ATG13O75143 517 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms