RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 CRISPLD1Q9H336 500 aa12.16□□□□□ -0.46
CDCP1-203ENST00000490471 SNX25Q9H3E2 840 aa12.16□□□□□ -0.46
CDCP1-203ENST00000490471 PDE11AQ9HCR9 933 aa12.16□□□□□ -0.46
CDCP1-203ENST00000490471 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
CDCP1-203ENST00000490471 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
CDCP1-203ENST00000490471 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
CDCP1-203ENST00000490471 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 NUP210Q8TEM1 1887 aaPredicted RBP12.15□□□□□ -0.46
CDCP1-203ENST00000490471 PVALEFA0A1B0GWK0 134 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 TRIM66O15016 1216 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 LRP3O75074 770 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 PAPSS2O95340 614 aaPredicted RBP12.15□□□□□ -0.46
CDCP1-203ENST00000490471 VNN2O95498 520 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 P4HA1P13674 534 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 ATF6P18850 670 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 ATICP31939 592 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 CTHP32929 405 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 MAGEA11P43364 429 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 ME1P48163 572 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 IFNAR2P48551 515 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 CYP4F8P98187 520 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 RUNX3Q13761 415 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 KCNB1Q14721 858 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 CEP68Q76N32 757 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 XXYLT1Q8NBI6 393 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 NELL1Q92832 810 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 CBWD1Q9BRT8 395 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 HSPBP1Q9NZL4 362 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
CDCP1-203ENST00000490471 USP18Q9UMW8 372 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 PATJQ8NI35 1801 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 TICRRQ7Z2Z1 1910 aa12.15□□□□□ -0.46
CDCP1-203ENST00000490471 ANK1P16157 1881 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 SOAT2O75908 522 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 NOL4O94818 638 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 F11P03951 625 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 CKMP06732 381 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 RETP07949 1114 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 DRD1P21728 446 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 GRIK1P39086 918 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 KCNA1Q09470 495 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 PSMD2Q13200 908 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 FZD5Q13467 585 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 SIM2Q14190 667 aaPredicted RBP12.14□□□□□ -0.47
CDCP1-203ENST00000490471 PRR23BQ6ZRT6 265 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.14□□□□□ -0.47
CDCP1-203ENST00000490471 LRRTM3Q86VH5 581 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 ATP2A3Q93084 1043 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 SYAP1Q96A49 352 aaPredicted RBP12.14□□□□□ -0.47
CDCP1-203ENST00000490471 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 SLC46A2Q9BY10 475 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 MTMR12Q9C0I1 747 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 TRPM5Q9NZQ8 1165 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 USP25Q9UHP3 1055 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 GTF3C4Q9UKN8 822 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 CDV3Q9UKY7 258 aaKnown RBP12.14□□□□□ -0.47
CDCP1-203ENST00000490471 FANCMQ8IYD8 2048 aa12.14□□□□□ -0.47
CDCP1-203ENST00000490471 CCDC163A0A0D9SF12 145 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 ARNTLO00327 626 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 SLC9A3R1O14745 358 aaPredicted RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 GABRDO14764 452 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 EXOC3O60645 756 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 MYL1P05976 194 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 DLATP10515 647 aaKnown RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 WARSP23381 471 aaKnown RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 HOXA6P31267 233 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 GNL1P36915 607 aaPredicted RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 CASP5P51878 434 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 PON2Q15165 354 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 SNRNP35Q16560 246 aaKnown RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 PREPLQ4J6C6 727 aaPredicted RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 STXBP5Q5T5C0 1151 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 CAMKK1Q8N5S9 505 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 TTC9BQ8N6N2 239 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 KIAA1958Q8N8K9 716 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 SYT15Q9BQS2 421 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 IL21Q9HBE4 155 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 TRPC7Q9HCX4 862 aa12.13□□□□□ -0.47
CDCP1-203ENST00000490471 DUS2Q9NX74 493 aaKnown RBP12.13□□□□□ -0.47
CDCP1-203ENST00000490471 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms