RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 ZC3H3Q8IXZ2 948 aaKnown RBP9.5□□□□□ -0.89
SKAP2-207ENST00000490456 OR5B17Q8NGF7 314 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 PLEKHO2Q8TD55 490 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 NELL2Q99435 816 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 DUSP9Q99956 384 aaKnown RBP9.5□□□□□ -0.89
SKAP2-207ENST00000490456 GPR62Q9BZJ7 368 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 PRMT8Q9NR22 394 aaPredicted RBP9.5□□□□□ -0.89
SKAP2-207ENST00000490456 INTS13Q9NVM9 706 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 ZDHHC7Q9NXF8 308 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 RWDD2AQ9UIY3 292 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
SKAP2-207ENST00000490456 PTPRJQ12913 1337 aa9.5□□□□□ -0.89
SKAP2-207ENST00000490456 COL4A3Q01955 1670 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 TDRD15B5MCY1 1934 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 LRRIQ3A6PVS8 624 aaPredicted RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 I3L4J1 428 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 TERTO14746 1132 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 PPEF2O14830 753 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 MAPK13O15264 365 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 TEX28O15482 410 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 TRAPPC3O43617 180 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 RFPL2O75678 378 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 ITGB3P05106 788 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 RETP07949 1114 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 KRT19P08727 400 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 POLR2BP30876 1174 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 BRCC3P46736 316 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 RPS9P46781 194 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 VAMP7P51809 220 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 NRLP54845 237 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 GPC5P78333 572 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 DLG4P78352 724 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 ELAVL2Q12926 359 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 NFKBIBQ15653 356 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 STX1AQ16623 288 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CCDC40Q4G0X9 1142 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 SLC44A4Q53GD3 710 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 FAM171A1Q5VUB5 890 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CD300LGQ6UXG3 332 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 INTS8Q75QN2 995 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 MTSS1LQ765P7 747 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 USP37Q86T82 979 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CSGALNACT2Q8N6G5 542 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CELF5Q8N6W0 485 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 C1orf127Q8N9H9 656 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CLDN23Q96B33 292 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 ZNF707Q96C28 371 aaPredicted RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 B3GALT6Q96L58 329 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 CEP63Q96MT8 703 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 MKNK1Q9BUB5 465 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 HERC2P3Q9BVR0 1158 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 GZF1Q9H116 711 aaPredicted RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 ITGA11Q9UKX5 1188 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 AGAP1Q9UPQ3 857 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 R3HCC1Q9Y3T6 440 aaKnown RBP9.49□□□□□ -0.89
SKAP2-207ENST00000490456 FRYQ5TBA9 3013 aa9.49□□□□□ -0.89
SKAP2-207ENST00000490456 TCHHQ07283 1943 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 ANO9A1A5B4 782 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 PIRO00625 290 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 C2CD2LO14523 706 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 PHACTR2O75167 634 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 EFEMP2O95967 443 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TRIM49P0CI25 452 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TRIM49CP0CI26 452 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 ERCC5P28715 1186 aaPredicted RBP9.48□□□□□ -0.89
SKAP2-207ENST00000490456 PMLP29590 882 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 GLUD2P49448 558 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 AP3M2P53677 418 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 RBP5P82980 135 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TYRO3Q06418 890 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 BFSP1Q12934 665 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 BIRC3Q13489 604 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 PPP2R5DQ14738 602 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TPD52L1Q16890 204 aaPredicted RBP9.48□□□□□ -0.89
SKAP2-207ENST00000490456 USP41Q3LFD5 358 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 FOXR2Q6PJQ5 311 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 DSTYKQ6XUX3 929 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 PRR23CQ6ZRP0 262 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TRAPPC11Q7Z392 1133 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 FILIP1Q7Z7B0 1213 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 METTL3Q86U44 580 aaKnown RBP9.48□□□□□ -0.89
SKAP2-207ENST00000490456 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
SKAP2-207ENST00000490456 FGF14Q92915 247 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 ZNF560Q96MR9 790 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 TTPALQ9BTX7 342 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 SRRTQ9BXP5 876 aaKnown RBP9.48□□□□□ -0.89
SKAP2-207ENST00000490456 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 RXFP1Q9HBX9 757 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 SEMA4GQ9NTN9 838 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 ANO10Q9NW15 660 aa9.48□□□□□ -0.89
SKAP2-207ENST00000490456 SIX4Q9UIU6 781 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms