RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SPICE1Q8N0Z3 855 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 OSBPL9Q96SU4 736 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 NELL2Q99435 816 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 PTDSS2Q9BVG9 487 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 CERS4Q9HA82 394 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 INTS13Q9NVM9 706 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 ZNF212Q9UDV6 495 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 REXO2Q9Y3B8 237 aaKnown RBP4.76□□□□□ -1.65
CD46-216ENST00000490278 DAAM1Q9Y4D1 1078 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 LOC102723971A0A1B0GUV8 181 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 A0A1W2PPC4 97 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 FGF18O76093 207 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 INMTO95050 263 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 SETSIPP0DME0 302 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 FGFR2P21802 821 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 IL1R2P27930 398 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 PMS2P11Q13670 270 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 ARHGEF7Q14155 803 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 SLC29A2Q14542 456 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 INSCQ1MX18 579 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 ARL13BQ3SXY8 428 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 DGKKQ5KSL6 1271 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 LY6G5CQ5SRR4 150 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 RBM20Q5T481 1227 aaKnown RBP4.75□□□□□ -1.65
CD46-216ENST00000490278 FNDC7Q5VTL7 733 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 MRGPREQ86SM8 312 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 GPR149Q86SP6 731 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 ZNF280BQ86YH2 543 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 PROKR1Q8TCW9 393 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
CD46-216ENST00000490278 TBCCD1Q9NVR7 557 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 ANKFY1Q9P2R3 1169 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 MYO1AQ9UBC5 1043 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 TAGLN3Q9UI15 199 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 MID2Q9UJV3 735 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 HS3ST4Q9Y661 456 aa4.75□□□□□ -1.65
CD46-216ENST00000490278 CLCA1A8K7I4 914 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 H7C4K7 107 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 RAB27BO00194 218 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 AREL1O15033 823 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 CCP110O43303 1012 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 LDHAP00338 332 aaKnown RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 SRGNP10124 158 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ACVR2AP27037 513 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 PPIFP30405 207 aaKnown RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 DGKEP52429 567 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 SCAPQ12770 1279 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 MYO1EQ12965 1108 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 E2F2Q14209 437 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ARHGAP40Q5TG30 622 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.74□□□□□ -1.65
CD46-216ENST00000490278 SSH3Q8TE77 659 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 SMCR8Q8TEV9 937 aaPredicted RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 KIAA1191Q96A73 305 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ZNF747Q9BV97 191 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ZNF341Q9BYN7 854 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 VPS11Q9H270 941 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 DHX36Q9H2U1 1008 aaKnown RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 ARFGAP3Q9NP61 516 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 PLCB1Q9NQ66 1216 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 TBC1D23Q9NUY8 699 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 TESQ9UGI8 421 aaKnown RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 NDRG4Q9ULP0 352 aaKnown RBP4.74□□□□□ -1.65
CD46-216ENST00000490278 TBC1D30Q9Y2I9 924 aa4.74□□□□□ -1.65
CD46-216ENST00000490278 ABHD14A-ACY1A0A1B0GW23 586 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 PIPSLA2A3N6 862 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 hCG_1984214I3L0E3 225 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 A1BGP04217 495 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 ITGAMP11215 1152 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 HARSP12081 509 aaKnown RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 BTF3P20290 206 aaKnown RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 MAKP20794 623 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 ABCB4P21439 1286 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 CPT1AP50416 773 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 PRKAG1P54619 331 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 PTPAQ15257 358 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 NPY5RQ15761 445 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 ZIK1Q3SY52 487 aaPredicted RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 VPS53Q5VIR6 699 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 ABHD17BQ5VST6 288 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 RRAGBQ5VZM2 374 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 ICE2Q659A1 982 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 RGS7BPQ6MZT1 257 aaPredicted RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 C1orf228Q6PIY5 440 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 CATSPERGQ6ZRH7 1159 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SKAP1Q86WV1 359 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 TXLNBQ8N3L3 684 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 LNX2Q8N448 690 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 VGLL2Q8N8G2 317 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 FANCBQ8NB91 859 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 B3GALNT2Q8NCR0 500 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SLC30A5Q8TAD4 765 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 BPIFB1Q8TDL5 484 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 ASB10Q8WXI3 467 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms