RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C3orf38Q5JPI3 329 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 ARHGAP40Q5TG30 622 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 DCAF12L1Q5VU92 463 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 MAVSQ7Z434 540 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 SESTD1Q86VW0 696 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 SLC9A6Q92581 669 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 APIPQ96GX9 242 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 PTDSS2Q9BVG9 487 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 CXorf36Q9H7Y0 433 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 KLC4Q9NSK0 619 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 POLR2AP24928 1970 aaKnown RBP6.46□□□□□ -1.37
CCDC39-206ENST00000489868 TRIM43BA6NCK2 446 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 LINC00473A8K010 186 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 GOLIM4O00461 696 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 CSF1RP07333 972 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 BRAFP15056 766 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 PPIFP30405 207 aaKnown RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 INHBEP58166 350 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 FAM193AP78312 1265 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 MYO1EQ12965 1108 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 POLD3Q15054 466 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 CNGA2Q16280 664 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 RGS7BPQ6MZT1 257 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 DARS2Q6PI48 645 aaKnown RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 LAYNQ6UX15 382 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 ZDHHC24Q6UX98 284 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 MPP5Q8N3R9 675 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 FAM98AQ8NCA5 519 aaKnown RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 RAPGEF4Q8WZA2 1011 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 FKBP10Q96AY3 582 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 TRIM43Q96BQ3 446 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 C8orf48Q96LL4 319 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 APOL5Q9BWW9 433 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 MS4A7Q9GZW8 240 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 R3HDMLQ9H3Y0 253 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 DDX21Q9NR30 783 aaKnown RBP eCLIP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 IL17RBQ9NRM6 502 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 SACM1LQ9NTJ5 587 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 COL20A1Q9P218 1284 aa6.46□□□□□ -1.38
CCDC39-206ENST00000489868 NDRG4Q9ULP0 352 aaKnown RBP6.46□□□□□ -1.38
CCDC39-206ENST00000489868 ISM1B1AKI9 464 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 TBC1D4O60343 1298 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 GRIA3P42263 894 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 WNT3P56703 355 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 TBCCQ15814 346 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 NBPF8Q3BBV2 869 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 ICE2Q659A1 982 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 GAS2L3Q86XJ1 694 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 ATG4AQ8WYN0 398 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 PBKQ96KB5 322 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 SHOC2Q9UQ13 582 aa6.45□□□□□ -1.38
CCDC39-206ENST00000489868 ZAR1LA6NP61 321 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 MYO1CO00159 1063 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 SUV39H1O43463 412 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 C1QL1O75973 258 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 NUDT3O95989 172 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 JUPP14923 745 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 LIPAP38571 399 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 CLCN2P51788 898 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 RPS16P62249 146 aaKnown RBP6.44□□□□□ -1.38
CCDC39-206ENST00000489868 RAB32Q13637 225 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 SMN1Q16637 294 aaKnown RBP6.44□□□□□ -1.38
CCDC39-206ENST00000489868 NMD3Q96D46 503 aaKnown RBP6.44□□□□□ -1.38
CCDC39-206ENST00000489868 ZG16BQ96DA0 208 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 SUCLG2Q96I99 432 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 MOGAT1Q96PD6 335 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 NELL2Q99435 816 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 ZNF518BQ9C0D4 1074 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 LRRC27Q9C0I9 530 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 RIOX1Q9H6W3 641 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
CCDC39-206ENST00000489868 ZNHIT2Q9UHR6 403 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 TLK1Q9UKI8 766 aa6.44□□□□□ -1.38
CCDC39-206ENST00000489868 F8W8V4 182 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 NR2F6P10588 404 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 IL1R1P14778 569 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 KCNA3P22001 575 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 DGKEP52429 567 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 SFRP4Q6FHJ7 346 aaPredicted RBP6.43□□□□□ -1.38
CCDC39-206ENST00000489868 DTX2Q86UW9 622 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 KLK15Q9H2R5 256 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 ST3GAL5Q9UNP4 418 aa6.43□□□□□ -1.38
CCDC39-206ENST00000489868 COL11A2P13942 1736 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-206ENST00000489868 PYCARD-AS1I3L0S3 204 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 MAP4K4O95819 1239 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-206ENST00000489868 CYP2C9P11712 490 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 ZFXP17010 805 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-206ENST00000489868 ITPKBP27987 946 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 ADORA2AP29274 412 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 CACNA2D1P54289 1103 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 KRT17Q04695 432 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 PPP4R4Q6NUP7 873 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 DUSP26Q9BV47 211 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 ALG8Q9BVK2 526 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 KIAA1586Q9HCI6 787 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 A1CFQ9NQ94 594 aaKnown RBP6.42□□□□□ -1.38
CCDC39-206ENST00000489868 ASB6Q9NWX5 421 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 EHD3Q9NZN3 535 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms