RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ARL2P36404 184 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 ALDH1A3P47895 512 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 QARSP47897 775 aaKnown RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 USP11P51784 963 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 MRPS21P82921 87 aaKnown RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 NFKB2Q00653 900 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 EXOSC10Q01780 885 aaKnown RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 NFATC3Q12968 1075 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 PLD1Q13393 1074 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 TFDP1Q14186 410 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 EML3Q32P44 896 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 EEF1DP3Q658K8 133 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 CENPPQ6IPU0 288 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 CC2D1AQ6P1N0 951 aaPredicted RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 SLC36A4Q6YBV0 504 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 RGL4Q8IZJ4 473 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 MAB21L3Q8N8X9 362 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 ATAD1Q8NBU5 361 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 EXOC4Q96A65 974 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF419Q96HQ0 510 aaPredicted RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 NAF1Q96HR8 494 aaKnown RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 MTRQ99707 1265 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 NFKBIZQ9BYH8 718 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 LRRC2Q9BYS8 371 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 ZDHHC5Q9C0B5 715 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 CD93Q9NPY3 652 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 GMIPQ9P107 970 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 PPME1Q9Y570 386 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 ASB3Q9Y575 518 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 WNT6Q9Y6F9 365 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 RP1L1Q8IWN7 2480 aaPredicted RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 SMIM28A0A1B0GU29 152 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 FLRT2O43155 660 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 DEXIO95424 95 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 FGF19O95750 216 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 JUPP14923 745 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 GABRG2P18507 467 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 CDC25CP30307 473 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 NMT1P30419 496 aaKnown RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 HSPA4P34932 840 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 AVPR1AP37288 418 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 KIR2DL1P43626 348 aaPredicted RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 CDR1P51861 262 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 TMPRSS3P57727 454 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 NLRP5P59047 1200 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 BFSP1Q12934 665 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 TARDBPQ13148 414 aaKnown RBP eCLIP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 SERINC3Q13530 473 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 HLA-BQ31612 363 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 XKR9Q5GH70 373 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 TXNDC8Q6A555 127 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 MOXD1Q6UVY6 613 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 Q6ZUG5 572 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 USP49Q70CQ1 688 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 TMEM130Q8N3G9 435 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 CCDC26Q8TAB7 109 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 OSCP1Q8WVF1 389 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 TSC1Q92574 1164 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 DDX12PQ92771 950 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 ZMAT2Q96NC0 199 aaKnown RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 ACAP3Q96P50 834 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 LINC00597Q9H2U6 94 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 FAM124BQ9H5Z6 455 aaPredicted RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 DUS2Q9NX74 493 aaKnown RBP7.94□□□□□ -1.14
COL9A1-209ENST00000489861 CALCOCO1Q9P1Z2 691 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 PCDHGB2Q9Y5G2 931 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 MED13Q9UHV7 2174 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
COL9A1-209ENST00000489861 MTMR11A4FU01 709 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CLEC18AA5D8T8 446 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 MARCH6O60337 910 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 TDP2O95551 362 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 GCFC2P16383 781 aaKnown RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 IFNAR1P17181 557 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 ATF6P18850 670 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 YWHABP31946 246 aaKnown RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 MATKP42679 507 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 SLC6A11P48066 632 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 GPR17Q13304 367 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 MTF1Q14872 753 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 TBC1D25Q3MII6 688 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 C6orf132Q5T0Z8 1188 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 KIAA1614Q5VZ46 1190 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CLEC18BQ6UXF7 455 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 EFCAB13Q8IY85 973 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 EXD3Q8N9H8 876 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CLEC18CQ8NCF0 446 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 ETNPPLQ8TBG4 499 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 SNRNP27Q8WVK2 155 aaKnown RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 WASF1Q92558 559 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 KCNB2Q92953 911 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 BRF1Q92994 677 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 ATP2A3Q93084 1043 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 JAKMIP1Q96N16 626 aaKnown RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms