RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FAM50BQ9Y247 325 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CLUHO75153 1309 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 NOTCH4Q99466 2003 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 DENND4AQ7Z401 1863 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 C2CD4DB7Z1M9 353 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 LOC730098B7Z3J9 87 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 P4HA2O15460 535 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 XYLBO75191 536 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CILPO75339 1184 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 RHOP08100 348 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 POU2F2P09086 479 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 SLC9A1P19634 815 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 PTMSP20962 102 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 BDNFP23560 247 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CLCN6P51797 869 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 MYL5Q02045 173 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 SMARCB1Q12824 385 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 MTMR3Q13615 1198 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CUL2Q13617 745 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 NFE2Q16621 373 aaPredicted RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 MAN2A1Q16706 1144 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 DDR2Q16832 855 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ZSCAN23Q3MJ62 389 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CFAP221Q4G0U5 840 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ZNF394Q53GI3 561 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CYP26C1Q6V0L0 522 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 RRAGAQ7L523 313 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 SPATA2LQ8IUW3 424 aaPredicted RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 DHX40Q8IX18 779 aaKnown RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 AOPEPQ8N6M6 819 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 CCDC150Q8NCX0 1101 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ST13P5Q8NFI4 369 aaPredicted RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 TCEAL4Q96EI5 215 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 NECTIN4Q96NY8 510 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 MYADMQ96S97 322 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 CORO1BQ9BR76 489 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ZNF518BQ9C0D4 1074 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ELOVL4Q9GZR5 314 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 INTS2Q9H0H0 1204 aaKnown RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 CYP3A43Q9HB55 503 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
SSR1-210ENST00000489567 CISHQ9NSE2 258 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 TAB2Q9NYJ8 693 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 HSFX1Q9UBD0 423 aa8.37□□□□□ -1.07
SSR1-210ENST00000489567 MOSPD3O75425 235 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 CCDC130P13994 396 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 GJA1P17302 382 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PTPN2P17706 415 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ALDH1A3P47895 512 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 TUFMP49411 452 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 GSE1Q14687 1217 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 KRT31Q15323 416 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PABPC1LQ4VXU2 614 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 VWA3BQ502W6 1294 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PRSS36Q5K4E3 855 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 GJB7Q6PEY0 223 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 DNAJB7Q7Z6W7 309 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 UNC93AQ86WB7 457 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 TMC8Q8IU68 726 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 FAM114A1Q8IWE2 563 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 FUKQ8N0W3 1084 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 CRYBG2Q8N1P7 616 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 UBR7Q8N806 425 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 KHSRPQ92945 711 aaKnown RBP eCLIP8.36□□□□□ -1.072e-7■■■■□ 23.4
SSR1-210ENST00000489567 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PHF12Q96QT6 1004 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 NDST4Q9H3R1 872 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ABCB6Q9NP58 842 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 FAM49BQ9NUQ9 324 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 GCNT4Q9P109 453 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 BEST1O76090 585 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 LETM1O95202 739 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 CALCAP01258 141 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ATP1A3P13637 1013 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ZNF18P17022 549 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 HMGA1P17096 107 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 ACO1P21399 889 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 FSHRP23945 695 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 EEF1GP26641 437 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 PON1P27169 355 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ZNF165P49910 485 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 RAD23BP54727 409 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 EPHB3P54753 998 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 EPHA5P54756 1037 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 KCNMA1Q12791 1236 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 SKOR2Q2VWA4 1001 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 DPY19L2P1Q6NXN4 242 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms