RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 SOX17Q9H6I2 414 aaPredicted RBP9.65□□□□□ -0.86
TNRC6B-208ENST00000489500 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.86
TNRC6B-208ENST00000489500 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
TNRC6B-208ENST00000489500 C5orf42Q9H799 3197 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 CLDN3O15551 220 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 BRD1O95696 1058 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 ASGR2P07307 311 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 SPATA31D3P0C874 917 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 PLS3P13797 630 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 HOXA9P31269 272 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 RPL9P32969 192 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 MRE11P49959 708 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 TOB1P50616 345 aaPredicted RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 ECM1Q16610 540 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 RINT1Q6NUQ1 792 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 MPZL3Q6UWV2 235 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 SPATA31D4Q6ZUB0 917 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 C1orf186Q6ZWK4 172 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 BRAPQ7Z569 592 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 SYT2Q8N9I0 419 aaPredicted RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 FLCNQ8NFG4 579 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 HASPINQ8TF76 798 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 ATOH1Q92858 354 aaPredicted RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 BICD1Q96G01 975 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 KIF2CQ99661 725 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 ACO2Q99798 780 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 NTPCRQ9BSD7 190 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 KIFC3Q9BVG8 833 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 CDH22Q9UJ99 828 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-208ENST00000489500 VWA8A3KMH1 1905 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 A0A1W2PP55 124 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 PTGESO14684 152 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 SLC16A4O15374 487 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 ICMTO60725 284 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 TOM1L1O75674 476 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 RFPL2O75678 378 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 EFEMP2O95967 443 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 PLA2G4BP0C869 781 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 GRIK1P39086 918 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 GP2P55259 537 aaKnown RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 OSTNP61366 133 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 HYIQ5T013 277 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 NT5DC1Q5TFE4 455 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 EEF1DP3Q658K8 133 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 LILRA6Q6PI73 481 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 PRSS55Q6UWB4 352 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 ZPBP2Q6X784 338 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 MTSS1LQ765P7 747 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 GET4Q7L5D6 327 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 SHISA5Q8N114 240 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 ELMOD1Q8N336 334 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 APPL2Q8NEU8 664 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 LNX1Q8TBB1 728 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 RABGGTAQ92696 567 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 SHDQ96IW2 340 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 PPP1R10Q96QC0 940 aaKnown RBP9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 TSPAN18Q96SJ8 248 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 PLEKHA5Q9HAU0 1116 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 ARHGAP28Q9P2N2 729 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 EPS15L1Q9UBC2 864 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 WNT16Q9UBV4 365 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 FBXW11Q9UKB1 542 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 ODF2LQ9ULJ1 636 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 BACE2Q9Y5Z0 518 aa9.63□□□□□ -0.87
TNRC6B-208ENST00000489500 DOCK8Q8NF50 2099 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 SMIM28A0A1B0GU29 152 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 PP2D1A8MPX8 630 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 PRRG1O14668 218 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 SYN3O14994 580 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 LRG1P02750 347 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 C8AP07357 584 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 MYBP10242 640 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 SRFP11831 508 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 LAMP2P13473 410 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 KCNE1P15382 129 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 RPL17P18621 184 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 PAX3P23760 479 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 CDC25AP30304 524 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 OR1D2P34982 312 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 LONP1P36776 959 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 GRIA4P48058 902 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 SERPINB4P48594 390 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 LIG4P49917 911 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 CLCNKBP51801 687 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 RAB33AQ14088 237 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 UPP1Q16831 310 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 GLRA4Q5JXX5 417 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 RTP2Q5QGT7 225 aa9.62□□□□□ -0.87
TNRC6B-208ENST00000489500 EXOSC6Q5RKV6 272 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms