RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 KNTC1P50748 2209 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 M0QZQ0 153 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 CILPO75339 1184 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 KCNE1P15382 129 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 HSPA4P34932 840 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 GRM5P41594 1212 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 TUFMP49411 452 aaKnown RBP16.37■□□□□ 0.21
UFD1-209ENST00000489406 ZNF77Q15935 545 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 C6orf118Q5T5N4 469 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 SNIP1Q8TAD8 396 aaKnown RBP16.37■□□□□ 0.21
UFD1-209ENST00000489406 MRPS31Q92665 395 aaKnown RBP16.37■□□□□ 0.21
UFD1-209ENST00000489406 HAS1Q92839 578 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 ACAP3Q96P50 834 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
UFD1-209ENST00000489406 BTBD3Q9Y2F9 522 aa16.37■□□□□ 0.21
UFD1-209ENST00000489406 FNDC3AQ9Y2H6 1198 aaKnown RBP16.37■□□□□ 0.21
UFD1-209ENST00000489406 CCDC196A0A1B0GTZ2 297 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 FLRT2O43155 660 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 ZNF883P0CG24 379 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 GABRG2P18507 467 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 CLDN6P56747 220 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 FAM160A1Q05DH4 1040 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 MESP2Q0VG99 397 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 MYBPC2Q14324 1141 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 INF2Q27J81 1249 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 HSF5Q4G112 596 aaPredicted RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 SYCP2LQ5T4T6 812 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 ARMCX5Q6P1M9 558 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 DBX2Q6ZNG2 339 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 APBB1IPQ7Z5R6 666 aaPredicted RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 TMPRSS12Q86WS5 348 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 ZNF419Q96HQ0 510 aaPredicted RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 EIF2AK1Q9BQI3 630 aaKnown RBP16.36■□□□□ 0.21
UFD1-209ENST00000489406 HSFX1Q9UBD0 423 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 PCDHA4Q9UN74 947 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 CYP8B1Q9UNU6 501 aa16.36■□□□□ 0.21
UFD1-209ENST00000489406 NOTCH2Q04721 2471 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 TNFSF14O43557 240 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 LYPLA2O95372 231 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 JUPP14923 745 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 MATKP42679 507 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 SLC6A11P48066 632 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 DMP1Q13316 513 aaPredicted RBP16.35■□□□□ 0.21
UFD1-209ENST00000489406 GAB4Q2WGN9 574 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 OVOS1Q6IE37 1185 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 CYP2S1Q96SQ9 504 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 KIFC3Q9BVG8 833 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 TUBGCP4Q9UGJ1 667 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 DENND4CQ5VZ89 1909 aa16.35■□□□□ 0.21
UFD1-209ENST00000489406 NFATC1O95644 943 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 CER1O95813 267 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 ADSSP30520 456 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 KIR2DL1P43626 348 aaPredicted RBP16.34■□□□□ 0.21
UFD1-209ENST00000489406 RCAN1P53805 252 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 KCNH2Q12809 1159 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 USP4Q13107 963 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 PTPRNQ16849 979 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 HLA-BQ31612 363 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 PKDCCQ504Y2 493 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 WDR45BQ5MNZ6 344 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 DSTYKQ6XUX3 929 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 FGF11Q92914 225 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
UFD1-209ENST00000489406 NACC1Q96RE7 527 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 SLC22A12Q96S37 553 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 CDT1Q9H211 546 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 TRPC7Q9HCX4 862 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 CNTN3Q9P232 1028 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 ANKMY1Q9P2S6 941 aa16.34■□□□□ 0.21
UFD1-209ENST00000489406 MAGED2Q9UNF1 606 aaPredicted RBP16.34■□□□□ 0.21
UFD1-209ENST00000489406 A0A1B0GTW7 788 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 MYMKA6NI61 221 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 NDUFS2O75306 463 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 KAT7O95251 611 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 CKMP06732 381 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 HMGA1P17096 107 aaKnown RBP16.33■□□□□ 0.2
UFD1-209ENST00000489406 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 SLC39A12Q504Y0 691 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 BLIDQ8IZY5 108 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 ZCCHC9Q8N567 271 aaKnown RBP16.33■□□□□ 0.2
UFD1-209ENST00000489406 STKLD1Q8NE28 680 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 TMEM176AQ96HP8 235 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 PNKPQ96T60 521 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 HSD17B14Q9BPX1 270 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 KCNK4Q9NYG8 393 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 TNFSF13BQ9Y275 285 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
UFD1-209ENST00000489406 M0R2N6 131 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms