RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CSH1P0DML2 217 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 CSH2P0DML3 217 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 ATF6P18850 670 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 ANXA13P27216 316 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 GRIK1P39086 918 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 NDST1P52848 882 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 EPHA5P54756 1037 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 PTPN21Q16825 1174 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 SLC5A9Q2M3M2 681 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 PRSS36Q5K4E3 855 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 ING5Q8WYH8 240 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 PCED1BQ96HM7 432 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 GCNAQ96QF7 691 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 DPEP3Q9H4B8 488 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 THAP9Q9H5L6 903 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 FAM124BQ9H5Z6 455 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-207ENST00000488591 SORCS3Q9UPU3 1222 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 NME7Q9Y5B8 376 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 TRIM66O15016 1216 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 LRRN2O75325 713 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 CD58P19256 250 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 BDNFP23560 247 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
CXCL12-207ENST00000488591 YWHAEP62258 255 aaKnown RBP16.03■□□□□ 0.16
CXCL12-207ENST00000488591 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MTMR3Q13615 1198 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 DDR2Q16832 855 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 CCDC142Q17RM4 750 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MTSS1LQ765P7 747 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 ACOT1Q86TX2 421 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 NPAS3Q8IXF0 933 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 CRYBG2Q8N1P7 616 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 GPR152Q8TDT2 470 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 KHSRPQ92945 711 aaKnown RBP eCLIP16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MCRS1Q96EZ8 462 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
CXCL12-207ENST00000488591 CEP295NLQ96MC4 621 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MED15Q96RN5 788 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 GPR88Q9GZN0 384 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 ELOVL4Q9GZR5 314 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 KCNK12Q9HB15 430 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 ANO10Q9NW15 660 aa16.03■□□□□ 0.16
CXCL12-207ENST00000488591 NOTCH4Q99466 2003 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 ASGR2P07307 311 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 CEBPBP17676 345 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 TBXAS1P24557 533 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-207ENST00000488591 CDC25CP30307 473 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 GPR15P49685 360 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 TDGQ13569 410 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 STX1AQ16623 288 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 UBALD2Q8IYN6 164 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 EDAQ92838 391 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 TATDN2Q93075 761 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 TCEAL4Q96EI5 215 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 SPATA17Q96L03 361 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 NT5C1BQ96P26 610 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 LRRC3Q9BY71 257 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 B3GNT5Q9BYG0 378 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 ATXN3LQ9H3M9 355 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 EHD2Q9NZN4 543 aa16.02■□□□□ 0.16
CXCL12-207ENST00000488591 UXTQ9UBK9 157 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-207ENST00000488591 MAGED2Q9UNF1 606 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-207ENST00000488591 A0A1W2PRU2 124 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 SLC38A8A6NNN8 435 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 CILPO75339 1184 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 GABRR2P28476 465 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 CCR2P41597 374 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 ZXDAP98168 799 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 LRMPQ12912 555 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 SDHAF4Q5VUM1 108 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 TMC8Q8IU68 726 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 C8orf48Q96LL4 319 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 EPHX3Q9H6B9 360 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 ZNF334Q9HCZ1 680 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-207ENST00000488591 CISHQ9NSE2 258 aa16.01■□□□□ 0.15
CXCL12-207ENST00000488591 DOCK8Q8NF50 2099 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 ANHXE9PGG2 379 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 CLDN5O00501 218 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 NOL4O94818 638 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 GJA1P17302 382 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 ORC1Q13415 861 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 CUL2Q13617 745 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 HTR4Q13639 388 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 TEAD2Q15562 447 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
CXCL12-207ENST00000488591 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 ENOX1Q8TC92 643 aaKnown RBP16■□□□□ 0.15
CXCL12-207ENST00000488591 TRMT2BQ96GJ1 504 aaKnown RBP16■□□□□ 0.15
CXCL12-207ENST00000488591 SMARCD1Q96GM5 515 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms