RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 BDNFP23560 247 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 GRIK1P39086 918 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 USP8P40818 1118 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 MTHFRP42898 656 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 VEPH1Q14D04 833 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
C9orf3-219ENST00000488186 ARHGAP44Q17R89 818 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 TMEM270Q6UE05 265 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 SCN4BQ8IWT1 228 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-219ENST00000488186 FUBP3Q96I24 572 aaKnown RBP eCLIP16.74■□□□□ 0.27
C9orf3-219ENST00000488186 S1PR5Q9H228 398 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 ABCB6Q9NP58 842 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 PRKAG3Q9UGI9 489 aa16.74■□□□□ 0.27
C9orf3-219ENST00000488186 TSC2P49815 1807 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-219ENST00000488186 CD19P15391 556 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 CYP2F1P24903 491 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 ANXA13P27216 316 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 HOXA9P31269 272 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 RPL10AP62906 217 aaKnown RBP16.73■□□□□ 0.27
C9orf3-219ENST00000488186 FANCCQ00597 558 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-219ENST00000488186 GJB7Q6PEY0 223 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 GPR149Q86SP6 731 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 SUSD6Q92537 303 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 KAT5Q92993 513 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 JAKMIP2Q96AA8 810 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 PCED1BQ96HM7 432 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 LPIN3Q9BQK8 851 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 ELOVL4Q9GZR5 314 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 FAM49BQ9NUQ9 324 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 HMGXB4Q9UGU5 601 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 DNAJC12Q9UKB3 198 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 PLXNA3P51805 1871 aa16.73■□□□□ 0.27
C9orf3-219ENST00000488186 TCF20Q9UGU0 1960 aaKnown RBP16.72■□□□□ 0.27
C9orf3-219ENST00000488186 MBTPS2O43462 519 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 SOAT2O75908 522 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 TPM3P06753 285 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 PTPN2P17706 415 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 UBASH3AP57075 661 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 KCNMA1Q12791 1236 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 SYCP1Q15431 976 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 CFAP221Q4G0U5 840 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 KLHDC7AQ5VTJ3 777 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 ITIH5Q86UX2 942 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 C12orf29Q8N999 325 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 NECTIN4Q96NY8 510 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 TWNKQ96RR1 684 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 PKMYT1Q99640 499 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
C9orf3-219ENST00000488186 FAM207AQ9NSI2 230 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-219ENST00000488186 KIAA1257Q9ULG3 409 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 ASB3Q9Y575 518 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
C9orf3-219ENST00000488186 CLDN5O00501 218 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 TRIM66O15016 1216 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 VNN2O95498 520 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 POU2F2P09086 479 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 RFX1P22670 979 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 ADORA2BP29275 332 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 MAGEA11P43364 429 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 RAD23BP54727 409 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 SLC8A3P57103 927 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 APBA1Q02410 837 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 CCDC142Q17RM4 750 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 SGO2Q562F6 1265 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 GRASPQ7Z6J2 395 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-219ENST00000488186 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 RBBP8NLQ8NC74 664 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-219ENST00000488186 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 GIPC2Q8TF65 315 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 CRISPLD1Q9H336 500 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 PLCB1Q9NQ66 1216 aa16.71■□□□□ 0.27
C9orf3-219ENST00000488186 USP15Q9Y4E8 981 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-219ENST00000488186 AP1G2O75843 785 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 PAEPP09466 180 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 VDRP11473 427 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 CCDC130P13994 396 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
C9orf3-219ENST00000488186 KCNQ1P51787 676 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 CBX2Q14781 532 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-219ENST00000488186 DDR2Q16832 855 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 APTXQ7Z2E3 356 aaKnown RBP16.7■□□□□ 0.26
C9orf3-219ENST00000488186 ZNF707Q96C28 371 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms