RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	SOX8	P57073	446 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	RAC3	P60763	192 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	DPT	Q07507	201 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SLC13A2	Q13183	592 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	MAN2A1	Q16706	1144 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ADCK5	Q3MIX3	580 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	USP39	Q53GS9	565 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ABHD15	Q6UXT9	468 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	AMER2	Q8N7J2	671 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TDRD7	Q8NHU6	1098 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	BRIX1	Q8TDN6	353 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CSGALNACT1	Q8TDX6	532 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TNPO1	Q92973	898 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	NEIL1	Q96FI4	390 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PAWR	Q96IZ0	340 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	COG8	Q96MW5	612 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PDCD2L	Q9BRP1	358 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SOX7	Q9BT81	388 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PAIP1	Q9H074	479 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	MRPL46	Q9H2W6	279 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	LDAH	Q9H6V9	325 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	MSL2	Q9HCI7	577 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SERHL	Q9NQF3	203 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TMEM160	Q9NX00	188 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CEP72	Q9P209	647 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	MAGEL2	Q9UJ55	1249 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TMEM233	B4DJY2	109 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	FCHO1	O14526	889 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PLSCR1	O15162	318 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	NARS	O43776	548 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SEC24D	O94855	1032 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	RTN3	O95197	1032 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ARIH2	O95376	493 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	A1BG	P04217	495 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	AMY1A	P04745	511 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ALOX15	P16050	662 aa	Predicted RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PRDX5	P30044	214 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ACTN2	P35609	894 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	GPR15	P49685	360 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ANTXR2	P58335	489 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CD83	Q01151	205 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	UBE3A	Q05086	875 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SLC12A1	Q13621	1099 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	NFYC	Q13952	458 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	EIF4H	Q15056	248 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TST	Q16762	297 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CFAP58	Q5T655	872 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TMEM200B	Q69YZ2	307 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	KLHL17	Q6TDP4	642 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	GADL1	Q6ZQY3	521 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CCDC129	Q6ZRS4	1044 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CHD1L	Q86WJ1	897 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SNX32	Q86XE0	403 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	GLB1L2	Q8IW92	636 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	PCSK9	Q8NBP7	692 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	OR6B3	Q8NGW1	331 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	CALML6	Q8TD86	181 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	KBTBD7	Q8WVZ9	684 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	ST8SIA4	Q92187	359 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	EDA	Q92838	391 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	EXTL1	Q92935	676 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	LRRC37B	Q96QE4	947 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	LSM14B	Q9BX40	385 aa	Known RBP	4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	OSBPL6	Q9BZF3	934 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	GHITM	Q9H3K2	345 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	SAYSD1	Q9NPB0	183 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	RGL1	Q9NZL6	768 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023	TBC1D29	Q9UFV1	150 aa		4.06	□□□□□ -1.76
HFM1-208	ENST00000488023		A0A0G2JNJ9	132 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CLCA1	A8K7I4	914 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	F2RL2	O00254	374 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	DAPK3	O43293	454 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	TBC1D4	O60343	1298 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	USP1	O94782	785 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	HMGCR	P04035	888 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	APEX1	P27695	318 aa	Known RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CST5	P28325	142 aa	Predicted RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	OAS2	P29728	719 aa	Known RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	ZEB1	P37275	1124 aa	Predicted RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	UBA7	P41226	1012 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	STAT1	P42224	750 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	PHKA1	P46020	1223 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	POLD2	P49005	469 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CARS	P49589	748 aa	Known RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	PAPOLA	P51003	745 aa	Known RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	KCNQ1	P51787	676 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CLNS1A	P54105	237 aa	Known RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	PTH1R	Q03431	593 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CTBP1	Q13363	440 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	ERV3-1	Q14264	604 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	RAB39A	Q14964	217 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	CDC37	Q16543	378 aa	Predicted RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	GJC2	Q5T442	439 aa	Predicted RBP	4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	AGBL4	Q5VU57	503 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	TAX1BP1	Q86VP1	789 aa		4.05	□□□□□ -1.76
HFM1-208	ENST00000488023	FAM90A1	Q86YD7	464 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms