RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 BRD2P25440 801 aaKnown RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 CDH5P33151 784 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 MAGEA11P43364 429 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TUFMP49411 452 aaKnown RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 NDUFV1P49821 464 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TAP1Q03518 808 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 GOLGA8FQ08AF8 430 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 GOLGA8DPQ0D2H9 430 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 RAB33AQ14088 237 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 PTPROQ16827 1216 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 ASTE1Q2TB18 679 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 E4F1Q66K89 784 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TMC7Q7Z402 723 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 SLC30A5Q8TAD4 765 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 SPPL2BQ8TCT7 592 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 BCL7CQ8WUZ0 217 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 HSFY1Q96LI6 401 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 CHP1Q99653 195 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 DUSP16Q9BY84 665 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 STRIP2Q9ULQ0 834 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 PCDHB5Q9Y5E4 795 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 CITO14578 2027 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 MICAL3Q7RTP6 2002 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 GOLGA6L9A6NEM1 432 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 SOWAHDA6NJG2 315 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 GRXCR1A8MXD5 290 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 M0QYV0 167 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TRIM66O15016 1216 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 RTN2O75298 545 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MICAL2O94851 1124 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CXCL14O95715 111 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CYP1A1P04798 512 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CALB1P05937 261 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MMEP08473 750 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CPB1P15086 417 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 NPR3P17342 541 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ACAT1P24752 427 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 DEKP35659 375 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ACADSBP45954 432 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CCZ1BP86790 482 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CCZ1P86791 482 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 FMO1Q01740 532 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CYP27A1Q02318 531 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CENPCQ03188 943 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 BST2Q10589 180 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CLEC16AQ2KHT3 1053 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TAF3Q5VWG9 929 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ZDHHC17Q8IUH5 632 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TMEM139Q8IV31 216 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 OR10T2Q8NGX3 314 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 SPPL3Q8TCT6 385 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 IPO4Q8TEX9 1081 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TFAP2BQ92481 460 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TCF25Q9BQ70 676 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 C17orf80Q9BSJ5 609 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 MED10Q9BTT4 135 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TSGA10Q9BZW7 698 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 WDR35Q9P2L0 1181 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 AFF4Q9UHB7 1163 aaKnown RBP11.69□□□□□ -0.54
HDLBP-242ENST00000488013 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
HDLBP-242ENST00000488013 A0A087X0T9 212 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 LILRB3O75022 631 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 FAM228BP0C875 321 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 UNGP13051 313 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-242ENST00000488013 MYOGP15173 224 aa11.68□□□□□ -0.54
HDLBP-242ENST00000488013 CHRNB2P17787 502 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms