RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CORO1BQ9BR76 489 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 GPR88Q9GZN0 384 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 INTS2Q9H0H0 1204 aaKnown RBP15.58■□□□□ 0.08
LIMS3-205ENST00000487150 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CRTAC1Q9NQ79 661 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CISHQ9NSE2 258 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 GDE1Q9NZC3 331 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 EPS15L1Q9UBC2 864 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CDH7Q9ULB5 785 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 SLC27A5Q9Y2P5 690 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 PES1O00541 588 aaKnown RBP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 CD58P19256 250 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 RFX1P22670 979 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 SLC8A3P57103 927 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 VWA3BQ502W6 1294 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 ARHGAP15Q53QZ3 475 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 C11orf57Q6ZUT1 292 aaPredicted RBP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 MTSS1LQ765P7 747 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 IRF2BP1Q8IU81 584 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 TTC9BQ8N6N2 239 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 SPATA17Q96L03 361 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 MED10Q9BTT4 135 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 SDCBP2Q9H190 292 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 CRISPLD1Q9H336 500 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 NDST4Q9H3R1 872 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 DMAP1Q9NPF5 467 aaPredicted RBP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 TMLHEQ9NVH6 421 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 CEP72Q9P209 647 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 DNMT3BQ9UBC3 853 aaKnown RBP15.57■□□□□ 0.08
LIMS3-205ENST00000487150 PLXNA3P51805 1871 aa15.57■□□□□ 0.08
LIMS3-205ENST00000487150 BECN2A8MW95 431 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 ATP2C2O75185 946 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 ATF6P18850 670 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 GRIK1P39086 918 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 ANO6Q4KMQ2 910 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 FKBP15Q5T1M5 1219 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 CDKAL1Q5VV42 579 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 DNAJB7Q7Z6W7 309 aaPredicted RBP15.56■□□□□ 0.08
LIMS3-205ENST00000487150 ACOT1Q86TX2 421 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 FAM35AQ86V20 835 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 SCN4BQ8IWT1 228 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 EHBP1Q8NDI1 1231 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 TRMT2BQ96GJ1 504 aaKnown RBP15.56■□□□□ 0.08
LIMS3-205ENST00000487150 C8orf48Q96LL4 319 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 DPEP3Q9H4B8 488 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 IGSF9Q9P2J2 1179 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 KIAA1257Q9ULG3 409 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 DAAM1Q9Y4D1 1078 aa15.56■□□□□ 0.08
LIMS3-205ENST00000487150 SYCE3A1L190 88 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 SOBPA7XYQ1 873 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 C2CD4DB7Z1M9 353 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 TNFRSF10AO00220 468 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 HCRTO43612 131 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 FAM200BP0CF97 657 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 BDNFP23560 247 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 CYP2F1P24903 491 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 DDX6P26196 483 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIMS3-205ENST00000487150 ZNF165P49910 485 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 MFAP3P55082 362 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 STILQ15468 1287 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 TRIM65Q6PJ69 517 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 FGF13Q92913 245 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 TMEM176AQ96HP8 235 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 PNPLA8Q9NP80 782 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 KRT82Q9NSB4 513 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 SAMSN1Q9NSI8 373 aaKnown RBP15.55■□□□□ 0.08
LIMS3-205ENST00000487150 HCFC1R1Q9NWW0 138 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 APEX2Q9UBZ4 518 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 CDH22Q9UJ99 828 aa15.55■□□□□ 0.08
LIMS3-205ENST00000487150 SOAT2O75908 522 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 NOL4O94818 638 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 RTN3O95197 1032 aaPredicted RBP15.54■□□□□ 0.08
LIMS3-205ENST00000487150 PAEPP09466 180 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 MYL4P12829 197 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 ALADP13716 330 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 CDK11BP21127 795 aaKnown RBP15.54■□□□□ 0.08
LIMS3-205ENST00000487150 PPP3CCP48454 512 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 PDE6CP51160 858 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 LRMPQ12912 555 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 PRSS36Q5K4E3 855 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 DENND5BQ6ZUT9 1274 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 TMC8Q8IU68 726 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 AOPEPQ8N6M6 819 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 LMO3Q8TAP4 145 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 TATDN2Q93075 761 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 MYRFLQ96LU7 910 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 HEXIM2Q96MH2 286 aaKnown RBP15.54■□□□□ 0.08
LIMS3-205ENST00000487150 HNRNPABQ99729 332 aaKnown RBP15.54■□□□□ 0.08
LIMS3-205ENST00000487150 ARID3AQ99856 593 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 LPIN3Q9BQK8 851 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 COL25A1Q9BXS0 654 aaPredicted RBP15.54■□□□□ 0.08
LIMS3-205ENST00000487150 B3GNT5Q9BYG0 378 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 ZNF518BQ9C0D4 1074 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 COMMD8Q9NX08 183 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 HMGXB4Q9UGU5 601 aa15.54■□□□□ 0.08
LIMS3-205ENST00000487150 AP1G2O75843 785 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms