RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PCDHB8	Q9UN66	801 aa		14	□□□□□ -0.17
NR1H3-223	ENST00000486991	R3HCC1	Q9Y3T6	440 aa	Known RBP	14	□□□□□ -0.17
NR1H3-223	ENST00000486991	DNAH14	Q0VDD8	3507 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991		A0A1B0GTH6	734 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	PIR	O00625	290 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	AP5Z1	O43299	807 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	ITGB3	P05106	788 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	POU2F2	P09086	479 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	HOXA9	P31269	272 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	ELF1	P32519	619 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	PIK3CA	P42336	1068 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	STARD6	P59095	220 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	CETN1	Q12798	172 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	TRPC3	Q13507	836 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	ZACN	Q401N2	412 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	C9orf57	Q5W0N0	161 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	C1orf127	Q8N9H9	656 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	CXorf38	Q8TB03	319 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	TAS1R2	Q8TE23	839 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	CRACR2A	Q9BSW2	395 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	PLA2G2F	Q9BZM2	168 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	XPO4	Q9C0E2	1151 aa	Known RBP	13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	FBXL5	Q9UKA1	691 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	ITGA11	Q9UKX5	1188 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	PTPRD	P23468	1912 aa		13.99	□□□□□ -0.17
NR1H3-223	ENST00000486991	F5	P12259	2224 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	CACNA1I	Q9P0X4	2223 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	OBSL1	O75147	1896 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	ARHGEF37	A1IGU5	675 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	NRG2	O14511	850 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	P4HA2	O15460	535 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	TEX33	O43247	280 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	OAZ2	O95190	189 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	VNN1	O95497	513 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	HLA-DRA	P01903	254 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	TPM3	P06753	285 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	POLR2B	P30876	1174 aa	Known RBP	13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	LILRA4	P59901	499 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	NCOA4	Q13772	614 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	UBXN2B	Q14CS0	331 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	SLC44A4	Q53GD3	710 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	SARM1	Q6SZW1	724 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	GBP6	Q6ZN66	633 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	NPAS3	Q8IXF0	933 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	FBXL13	Q8NEE6	735 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	MCRS1	Q96EZ8	462 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	GCNT4	Q9P109	453 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	MAFF	Q9ULX9	164 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	AGAP1	Q9UPQ3	857 aa		13.98	□□□□□ -0.17
NR1H3-223	ENST00000486991	SEC24A	O95486	1093 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	CST3	P01034	146 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	MYL6	P60660	151 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	RBP5	P82980	135 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	FOXK2	Q01167	660 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	NR1I3	Q14994	352 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	SYCP1	Q15431	976 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	MLF2	Q15773	248 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	EXOC3L4	Q17RC7	722 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	SLC5A9	Q2M3M2	681 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	ZNF280D	Q6N043	979 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	TCEAL8	Q8IYN2	117 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	ZNF461	Q8TAF7	563 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	HINFP	Q9BQA5	517 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	INTS2	Q9H0H0	1204 aa	Known RBP	13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	RAB20	Q9NX57	234 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	SIX4	Q9UIU6	781 aa		13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-223	ENST00000486991	GREB1	Q4ZG55	1949 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	MIA3	Q5JRA6	1907 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	KANSL1L	A0AUZ9	987 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	MED19	A0JLT2	244 aa	Predicted RBP	13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	GTPBP10	A4D1E9	387 aa	Known RBP	13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	FAM170B	A6NMN3	283 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	PMM2	O15305	246 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	ATF2	P15336	505 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	CEBPB	P17676	345 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	SLC9A1	P19634	815 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	TYMP	P19971	482 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	ZNF75D	P51815	510 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	ARPP19	P56211	112 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	LRMP	Q12912	555 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	CTXN3	Q4LDR2	81 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	PABPC1L	Q4VXU2	614 aa	Known RBP	13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	WDR44	Q5JSH3	913 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	TPGS2	Q68CL5	300 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	ERMP1	Q7Z2K6	904 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	CCDC150	Q8NCX0	1101 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	EHBP1	Q8NDI1	1231 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	SEMA4D	Q92854	862 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	ELMO3	Q96BJ8	720 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	SENP8	Q96LD8	212 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	PI4K2A	Q9BTU6	479 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	DDX23	Q9BUQ8	820 aa	Known RBP	13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	LSM14B	Q9BX40	385 aa	Known RBP	13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	IMPG2	Q9BZV3	1241 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms