RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 PHBP35232 272 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SNAP25P60880 206 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SLC25A3Q00325 362 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 CBX3Q13185 183 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MTM1Q13496 603 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MYBPC2Q14324 1141 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 HIF1AQ16665 826 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 NADK2Q4G0N4 442 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 EFHC1Q5JVL4 640 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SLC10A5Q5PT55 438 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MAP3K21Q5TCX8 1036 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ARPINQ7Z6K5 226 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 EXD1Q8NHP7 514 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ZFP28Q8NHY6 868 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 GAB3Q8WWW8 586 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 WDR83Q9BRX9 315 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 C1orf21Q9H246 121 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ACSS3Q9H6R3 686 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 NFASCO94856 1347 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 CLPTM1O96005 669 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 KITP10721 976 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PCSK6P29122 969 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 XIAPP98170 497 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 CCNIQ14094 377 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 UBAP2LQ14157 1087 aaKnown RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 HIC1Q14526 733 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 KLHL38Q2WGJ6 581 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 SH2D5Q6ZV89 423 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ZBTB8BQ8NAP8 495 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PIP4K2CQ8TBX8 421 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 USP6NLQ92738 828 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 SMYD3Q9H7B4 428 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PCDHGB4Q9UN71 923 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PCDHGB5Q9Y5G0 923 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 COL24A1Q17RW2 1714 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 SUPT3HO75486 399 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 KRT5P13647 590 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ZNF76P36508 570 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 SREBF1P36956 1147 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 GABPAQ06546 454 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PICALMQ13492 652 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 TLR1Q15399 786 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 TRIP10Q15642 601 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 MYLK3Q32MK0 819 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 RALGPS1Q5JS13 557 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ANKRD22Q5VYY1 191 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 TMC7Q7Z402 723 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 ATP11CQ8NB49 1132 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 FBXO36Q8NEA4 188 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 PPP1R14BQ96C90 147 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 APOPT1Q96IL0 206 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 FAM81BQ96LP2 452 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 MECRQ9BV79 373 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 RBM38Q9H0Z9 239 aaKnown RBP11.14□□□□□ -0.63
CCDC171-208ENST00000486641 HSPBP1Q9NZL4 362 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 SHOC2Q9UQ13 582 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 LZTS1Q9Y250 596 aa11.14□□□□□ -0.63
CCDC171-208ENST00000486641 K7ENM7 598 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 KLF11O14901 512 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 IFNB1P01574 187 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 TAL1P17542 331 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ATF7P17544 494 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 AQP5P55064 265 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 SLC18A2Q05940 514 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 MPP3Q13368 585 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 DRICH1Q6PGQ1 229 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 RHPN2Q8IUC4 686 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 PALM2Q8IXS6 379 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 DAW1Q8N136 415 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CEP70Q8NHQ1 597 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ACAP3Q96P50 834 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 PHF12Q96QT6 1004 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 MARCOQ9UEW3 520 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 SOX13Q9UN79 622 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 DRG1Q9Y295 367 aaKnown RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 MYPNQ86TC9 1320 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms