RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 GPM6BQ13491 265 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 MSANTD4Q8NCY6 345 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 SDCBP2Q9H190 292 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 LMCD1Q9NZU5 365 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 TUBGCP4Q9UGJ1 667 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 KIAA1257Q9ULG3 409 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 BARX2Q9UMQ3 279 aaPredicted RBP15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 SCINQ9Y6U3 715 aa15.47■□□□□ 0.07
POLR2J3-204ENST00000486319 C5orf67F2Z3F1 127 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 CALB1P05937 261 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 CFHP08603 1231 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 CD19P15391 556 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 RRM1P23921 792 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 PNPLA4P41247 253 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 MESDQ14696 234 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 GLRA4Q5JXX5 417 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 SPOUT1Q5T280 376 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 CCDC70Q6NSX1 233 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 ZNF598Q86UK7 904 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 MMGT1Q8N4V1 131 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 NOA1Q8NC60 698 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 SPATA4Q8NEY3 305 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 ACTRT1Q8TDG2 376 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 WHAMMQ8TF30 809 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 ZNF560Q96MR9 790 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 C11orf70Q9BRQ4 267 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 LHX5Q9H2C1 402 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 COL4A6Q14031 1691 aa15.46■□□□□ 0.07
POLR2J3-204ENST00000486319 PIRO00625 290 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 VDRP11473 427 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 ITGA4P13612 1032 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 MMP8P22894 467 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 RAB27AP51159 221 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 RBM10P98175 930 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 CLUL1Q15846 466 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 PTPROQ16827 1216 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 TMEM130Q8N3G9 435 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 UBL4BQ8N7F7 174 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 TFAP2BQ92481 460 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 C18orf25Q96B23 403 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 MS4A14Q96JA4 679 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 ZSWIM1Q9BR11 485 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 CARD9Q9H257 536 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 KLK14Q9P0G3 267 aa15.45■□□□□ 0.06
POLR2J3-204ENST00000486319 TDRD15B5MCY1 1934 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 DDX3YO15523 660 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 ZNF623O75123 536 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 MCM3P25205 808 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 C2orf54Q08AI8 447 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PTP4A2Q12974 167 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 STILQ15468 1287 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PLEKHA7Q6IQ23 1121 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 MMS22LQ6ZRQ5 1243 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 RASGEF1CQ8N431 466 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 NT5C1AQ9BXI3 368 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 DNAI2Q9GZS0 605 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 ANKZF1Q9H8Y5 726 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 AAASQ9NRG9 546 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 RNF19AQ9NV58 838 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 SLC38A7Q9NVC3 462 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PARVAQ9NVD7 372 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 LCMT1Q9UIC8 334 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 ANAPC7Q9UJX3 599 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 PCDHB12Q9Y5F1 795 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 SNX9Q9Y5X1 595 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 TRANK1O15050 2925 aa15.44■□□□□ 0.06
POLR2J3-204ENST00000486319 UNC80Q8N2C7 3258 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 TMEM110-MUSTN1A8MSY1 372 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 PGRMC1O00264 195 aaKnown RBP15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 CEP104O60308 925 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 RHOXF2BP0C7M4 288 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 COMTP21964 271 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 SSTR3P32745 418 aaPredicted RBP15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 SLC1A1P43005 524 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 NDST1P52848 882 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 SKIV2LQ15477 1246 aaKnown RBP15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 SV2CQ496J9 727 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 FBXO38Q6PIJ6 1188 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 C1orf131Q8NDD1 294 aaKnown RBP15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 LPPQ93052 612 aa15.43■□□□□ 0.06
POLR2J3-204ENST00000486319 MRPL38Q96DV4 380 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms