RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 HSFX1Q9UBD0 423 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 SIK3Q9Y2K2 1263 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 INSL5Q9Y5Q6 135 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 XYLBO75191 536 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 ZMYND10O75800 440 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 GLP2RO95838 553 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 PAEPP09466 180 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 HNRNPA1P09651 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP50-216ENST00000486184 VDRP11473 427 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 ACO1P21399 889 aaKnown RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 ADORA2BP29275 332 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 GRIK1P39086 918 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 RAD23BP54727 409 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 EPHB3P54753 998 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SLC8A3P57103 927 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 DUSP4Q13115 394 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 DRAP1Q14919 205 aaPredicted RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 TAF12Q16514 161 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 CES5AQ6NT32 575 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 ANKRD54Q6NXT1 300 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 TMEM184AQ6ZMB5 413 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SCN4BQ8IWT1 228 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 UBR7Q8N806 425 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SHC3Q92529 594 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 HLA-CQ95604 372 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SMARCD1Q96GM5 515 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 GANQ9H2C0 597 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
NUP50-216ENST00000486184 PIDD1Q9HB75 910 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 TMLHEQ9NVH6 421 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 CEP72Q9P209 647 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 HESX1Q9UBX0 185 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 COG5Q9UP83 839 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 YIPF1Q9Y548 306 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
NUP50-216ENST00000486184 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 TRIM66O15016 1216 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 MED7O43513 233 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 SEC24AO95486 1093 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 TPM1P09493 284 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 FAM200BP0CF97 657 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 HAPLN1P10915 354 aaPredicted RBP12.09□□□□□ -0.47
NUP50-216ENST00000486184 CCDC130P13994 396 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 KCNA5P22460 613 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 BDNFP23560 247 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 CYP2F1P24903 491 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 GNA15P30679 374 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 HOXA9P31269 272 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 STAT1P42224 750 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 MAGEA11P43364 429 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 BPIFB4P59827 614 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 PTK2Q05397 1052 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 TWF1Q12792 350 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 KCNC3Q14003 757 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 STILQ15468 1287 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 CCDC142Q17RM4 750 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
NUP50-216ENST00000486184 SARM1Q6SZW1 724 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 VSTM1Q6UX27 236 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 FAM35AQ86V20 835 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 SLC2A14Q8TDB8 520 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 PKMYT1Q99640 499 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 APOL5Q9BWW9 433 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 KRT82Q9NSB4 513 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
NUP50-216ENST00000486184 AJAP1Q9UKB5 411 aaPredicted RBP12.09□□□□□ -0.47
NUP50-216ENST00000486184 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUP50-216ENST00000486184 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
NUP50-216ENST00000486184 CCDC195A0A1B0GUA6 201 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 F8VZ95 297 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 FOXN3O00409 490 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 CLDN5O00501 218 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 CCL16O15467 120 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 THAP12O43422 761 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms