RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 DUSP9Q99956 384 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 RPP25Q9BUL9 199 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 APOBEC3GQ9HC16 384 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 ZNF334Q9HCZ1 680 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 RBAKQ9NYW8 714 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 EPS15L1Q9UBC2 864 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 AFF4Q9UHB7 1163 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 MAN1B1Q9UKM7 699 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 CDY1Q9Y6F8 540 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 DOCK4Q8N1I0 1966 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 RALGAPA1Q6GYQ0 2036 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 PLXND1Q9Y4D7 1925 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CHD5Q8TDI0 1954 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CCDC195A0A1B0GUA6 201 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 OR6C75A6NL08 312 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ANHXE9PGG2 379 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PMM2O15305 246 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ATP9BO43861 1147 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
CUX1-208ENST00000485792 TACC1O75410 805 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ITGB3P05106 788 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ASGR2P07307 311 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 TRIM49P0CI25 452 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 TRIM49CP0CI26 452 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 POLR2BP30876 1174 aaKnown RBP6.15□□□□□ -1.42
CUX1-208ENST00000485792 HOXC13P31276 330 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PRCPP42785 496 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 MATR3P43243 847 aaKnown RBP eCLIP6.15□□□□□ -1.42
CUX1-208ENST00000485792 PGFP49763 221 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 UBE2HP62256 183 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 SMARCB1Q12824 385 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 MORC3Q14149 939 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 DUOXA2Q1HG44 320 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 SOWAHAQ2M3V2 549 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 MAP7D1Q3KQU3 841 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ZACNQ401N2 412 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PRSS36Q5K4E3 855 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ATAT1Q5SQI0 421 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PPP1R26Q5T8A7 1209 aaPredicted RBP6.15□□□□□ -1.42
CUX1-208ENST00000485792 WSCD1Q658N2 575 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 SPOPLQ6IQ16 392 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CES5AQ6NT32 575 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 BMP8AQ7Z5Y6 402 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PALB2Q86YC2 1186 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ADSSL1Q8N142 457 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PLPP7Q8NBV4 271 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ITFG1Q8TB96 612 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 RSAD2Q8WXG1 361 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 SEMA4DQ92854 862 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 TCEAL4Q96EI5 215 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CHFRQ96EP1 664 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 ASIC4Q96FT7 647 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 P2RY11Q96G91 374 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 RIPOR3Q96MK2 946 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 TWNKQ96RR1 684 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CGRRF1Q99675 332 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 GTPBP4Q9BZE4 634 aaKnown RBP6.15□□□□□ -1.42
CUX1-208ENST00000485792 ZCWPW1Q9H0M4 648 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 DPEP3Q9H4B8 488 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 EXOC1Q9NV70 894 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 CEP72Q9P209 647 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 MUTYHQ9UIF7 546 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 AJAP1Q9UKB5 411 aaPredicted RBP6.15□□□□□ -1.42
CUX1-208ENST00000485792 DSEQ9UL01 958 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 POLIQ9UNA4 740 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 COQ4Q9Y3A0 265 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 PCDHB11Q9Y5F2 797 aa6.15□□□□□ -1.42
CUX1-208ENST00000485792 MTMR11A4FU01 709 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ANTXRLA6NF34 631 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 CYB561D2O14569 222 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 ATP2C2O75185 946 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 KIF20AO95235 890 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 NR3C1P04150 777 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 C8AP07357 584 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ODC1P11926 461 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 GJA1P17302 382 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ACAT1P24752 427 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 WEE1P30291 646 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ATICP31939 592 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 MCM4P33991 863 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 RAP1GAPP47736 663 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 CYP2J2P51589 502 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 AP3M2P53677 418 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 MARSP56192 900 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 RBP5P82980 135 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 YWHAHQ04917 246 aaPredicted RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 SV2CQ496J9 727 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 CTXN3Q4LDR2 81 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ISM2Q6H9L7 571 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 OVOS1Q6IE37 1185 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ZNF280DQ6N043 979 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 DPY19L2P1Q6NXN4 242 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 TTI2Q6NXR4 508 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms