RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 INSL5Q9Y5Q6 135 aa16.48■□□□□ 0.23
RPUSD3-217ENST00000485705 GREB1Q4ZG55 1949 aa16.48■□□□□ 0.23
RPUSD3-217ENST00000485705 CCL16O15467 120 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 AP5Z1O43299 807 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 SRGAP2BP0DMP2 458 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 HAPLN1P10915 354 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 KRT5P13647 590 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 UCHL3P15374 230 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 BDNFP23560 247 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 TFF2Q03403 129 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 SMARCB1Q12824 385 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 FUKQ8N0W3 1084 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 SPPL2BQ8TCT7 592 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 ZNF707Q96C28 371 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 TMEM176AQ96HP8 235 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 SEPT5Q99719 369 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 NAA15Q9BXJ9 866 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 GPR88Q9GZN0 384 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 FAM124BQ9H5Z6 455 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 SFXN1Q9H9B4 322 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 TMEM30AQ9NV96 361 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 MAFFQ9ULX9 164 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 YIPF1Q9Y548 306 aa16.47■□□□□ 0.23
RPUSD3-217ENST00000485705 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 CCDC195A0A1B0GUA6 201 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 FOXN3O00409 490 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 ZNF132P52740 706 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 POLR2FP61218 127 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 TWF1Q12792 350 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 DRAP1Q14919 205 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 MAPRE1Q15691 268 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 SDHAF4Q5VUM1 108 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 C4orf50Q6ZRC1 276 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 ENOSF1Q7L5Y1 443 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 STKLD1Q8NE28 680 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 C2orf15Q8WU43 125 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 SHC3Q92529 594 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 MED10Q9BTT4 135 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 XPO4Q9C0E2 1151 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 NLRC4Q9NPP4 1024 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 DPP7Q9UHL4 492 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 CD207Q9UJ71 328 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 COG5Q9UP83 839 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
RPUSD3-217ENST00000485705 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 CD19P15391 556 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 HOXB8P17481 243 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ATF6P18850 670 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ADORA2BP29275 332 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 PBX1P40424 430 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 USP8P40818 1118 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 DDR2Q16832 855 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 CFAP221Q4G0U5 840 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 PPP1R26Q5T8A7 1209 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 FAM35AQ86V20 835 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 SCN4BQ8IWT1 228 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 SMRP1Q8NCR6 262 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 CMASQ8NFW8 434 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 GPR152Q8TDT2 470 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 TFAP2BQ92481 460 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 FUBP3Q96I24 572 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 FAM81BQ96LP2 452 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ZSWIM1Q9BR11 485 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 PRKD2Q9BZL6 878 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 ZDHHC7Q9NXF8 308 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 CEP72Q9P209 647 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 HSFX1Q9UBD0 423 aa16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 TCF20Q9UGU0 1960 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-217ENST00000485705 DOCK8Q8NF50 2099 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 A0A1W2PQC6 194 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 PAPLNO95428 1278 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 LRG1P02750 347 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 HOXA9P31269 272 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 RTL10Q7L3V2 364 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 GPIHBP1Q8IV16 184 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms