RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 LGALS16A8MUM7 142 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 MBTPS2O43462 519 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 BEST1O76090 585 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 SERPINC1P01008 464 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 LRG1P02750 347 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 KRT5P13647 590 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 GJA1P17302 382 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
APTX-227ENST00000485479 RAD23BP54727 409 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 TPGS2Q68CL5 300 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 PAQR9Q6ZVX9 377 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 TCEAL8Q8IYN2 117 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 ANKRD20A12PQ8NF67 263 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
APTX-227ENST00000485479 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
APTX-227ENST00000485479 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
APTX-227ENST00000485479 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 NT5C1AQ9BXI3 368 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 NOTCH4Q99466 2003 aa12.64□□□□□ -0.39
APTX-227ENST00000485479 F8VP50 259 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 NCK2O43639 380 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 TPM2P07951 284 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 CD19P15391 556 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
APTX-227ENST00000485479 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 UBR7Q8N806 425 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 ING5Q8WYH8 240 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 CORO1BQ9BR76 489 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 ADAM7Q9H2U9 754 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 CYP3A43Q9HB55 503 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 NLRC4Q9NPP4 1024 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 DZANK1Q9NVP4 752 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 DNAJC12Q9UKB3 198 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 COG5Q9UP83 839 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 GTPBP10A4D1E9 387 aaKnown RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 HAPLN1P10915 354 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 TBXAS1P24557 533 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 GRIK1P39086 918 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 FANCCQ00597 558 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 SLC5A9Q2M3M2 681 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 CCDC149Q6ZUS6 474 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
APTX-227ENST00000485479 TFAP2BQ92481 460 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 TMEM176AQ96HP8 235 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 ZSWIM1Q9BR11 485 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 RBSNQ9H1K0 784 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 SIK3Q9Y2K2 1263 aa12.63□□□□□ -0.39
APTX-227ENST00000485479 NOL4O94818 638 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 CCR2P41597 374 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 GCNT1Q02742 428 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
APTX-227ENST00000485479 LEXMQ3ZCV2 418 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 CES5AQ6NT32 575 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 GET4Q7L5D6 327 aaPredicted RBP12.62□□□□□ -0.39
APTX-227ENST00000485479 GPR149Q86SP6 731 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 SPPL2BQ8TCT7 592 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 TCEAL4Q96EI5 215 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
APTX-227ENST00000485479 ZNF334Q9HCZ1 680 aaPredicted RBP12.62□□□□□ -0.39
APTX-227ENST00000485479 ZDHHC7Q9NXF8 308 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
APTX-227ENST00000485479 LRRC10BA6NIK2 292 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 TULP2O00295 520 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 CFHP08603 1231 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 UCHL3P15374 230 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 MAP3K7CLP57077 242 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 POLR2FP61218 127 aaKnown RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 USP46P62068 366 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 PLD1Q13393 1074 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 POTEHQ6S545 545 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 C4orf50Q6ZRC1 276 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 UNC93AQ86WB7 457 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 CRYBG2Q8N1P7 616 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms