RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 HAUS4Q9H6D7 363 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 WDR27A2RRH5 827 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 CLDN5O00501 218 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 CHRNB2P17787 502 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 CDR1P51861 262 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 CDK17Q00537 523 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 CDR2Q01850 454 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 PTPROQ16827 1216 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 LCLAT1Q6UWP7 414 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 RNF19BQ6ZMZ0 732 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 PAQR9Q6ZVX9 377 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 ZNF571Q7Z3V5 609 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-207ENST00000485465 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-207ENST00000485465 AGPAT1Q99943 283 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 MED10Q9BTT4 135 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 ARHGAP20Q9P2F6 1191 aa18.65■□□□□ 0.58
CHMP3-207ENST00000485465 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHMP3-207ENST00000485465 MTMR11A4FU01 709 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 MICAL2O94851 1124 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 ABLIM3O94929 683 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 ADH1AP07327 375 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 MMEP08473 750 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 PLEKP08567 350 aaPredicted RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 CFHP08603 1231 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 FECHP22830 423 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 ADORA2BP29275 332 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 TDRD12Q587J7 1177 aaKnown RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 MRPL38Q96DV4 380 aaKnown RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 CHP1Q99653 195 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 SYT11Q9BT88 431 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 AFF4Q9UHB7 1163 aaKnown RBP18.64■□□□□ 0.57
CHMP3-207ENST00000485465 TSPAN16Q9UKR8 245 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 PCDHGC3Q9UN70 934 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 PCDHB5Q9Y5E4 795 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 ATP8B3O60423 1300 aa18.64■□□□□ 0.57
CHMP3-207ENST00000485465 VNN2O95498 520 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 PTMAP06454 111 aaKnown RBP18.63■□□□□ 0.57
CHMP3-207ENST00000485465 TNFAIP3P21580 790 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 KLRC2P26717 231 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 FMO1Q01740 532 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 CFAP221Q4G0U5 840 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 DENND1BQ6P3S1 775 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 FAM35AQ86V20 835 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 ANKRD52Q8NB46 1076 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 ATAD1Q8NBU5 361 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 FUBP3Q96I24 572 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHMP3-207ENST00000485465 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 ZNF518BQ9C0D4 1074 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 PDCL3Q9H2J4 239 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 ABCB6Q9NP58 842 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 ABI2Q9NYB9 513 aaPredicted RBP18.63■□□□□ 0.57
CHMP3-207ENST00000485465 CHD7Q9P2D1 2997 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 HESX1Q9UBX0 185 aa18.63■□□□□ 0.57
CHMP3-207ENST00000485465 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 M0QYV0 167 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 ATF2P15336 505 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 BDNFP23560 247 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
CHMP3-207ENST00000485465 ADCY1Q08828 1119 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-207ENST00000485465 GRIN2CQ14957 1233 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 ZNF697Q5TEC3 545 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 LILRA6Q6PI73 481 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 OLIG1Q8TAK6 271 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 UBA3Q8TBC4 463 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 SMARCD1Q96GM5 515 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 BAG1Q99933 345 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-207ENST00000485465 DUSP16Q9BY84 665 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 RHOBTB2Q9BYZ6 727 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 LHX5Q9H2C1 402 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 PRDM12Q9H4Q4 367 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 NHEJ1Q9H9Q4 299 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-207ENST00000485465 MAFFQ9ULX9 164 aa18.62■□□□□ 0.57
CHMP3-207ENST00000485465 COL4A4P53420 1690 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-207ENST00000485465 LAMA3Q16787 3333 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 TGM5O43548 720 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 CLASP2O75122 1294 aaKnown RBP18.61■□□□□ 0.57
CHMP3-207ENST00000485465 AP1G2O75843 785 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 C1RP00736 705 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 FAM200BP0CF97 657 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 CYP2F1P24903 491 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 MAGEA11P43364 429 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 BCAT1P54687 386 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 DUSP4Q13115 394 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 PKDCCQ504Y2 493 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 TRIM72Q6ZMU5 477 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 ADGRD2Q7Z7M1 963 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms