RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PI4K2BG5E9Z4 385 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 CILPO75339 1184 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 NDST1P52848 882 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 STX1AQ16623 288 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 TPD52L1Q16890 204 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-213ENST00000485080 CCDC142Q17RM4 750 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 SLC5A9Q2M3M2 681 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 MDH1BQ5I0G3 518 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 PDZD4Q76G19 769 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-213ENST00000485080 GET4Q7L5D6 327 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-213ENST00000485080 NPAS3Q8IXF0 933 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 SPATA17Q96L03 361 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 ELOVL4Q9GZR5 314 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 DPEP3Q9H4B8 488 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 IGSF9Q9P2J2 1179 aa18.94■□□□□ 0.62
SREBF1-213ENST00000485080 GTPBP10A4D1E9 387 aaKnown RBP18.93■□□□□ 0.62
SREBF1-213ENST00000485080 ANHXE9PGG2 379 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 MOSPD3O75425 235 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 SOAT2O75908 522 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 CLSTN1O94985 981 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 CSH1P0DML2 217 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 CSH2P0DML3 217 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 ALADP13716 330 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 HMGA1P17096 107 aaKnown RBP18.93■□□□□ 0.62
SREBF1-213ENST00000485080 TRIM21P19474 475 aaKnown RBP18.93■□□□□ 0.62
SREBF1-213ENST00000485080 TBXAS1P24557 533 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-213ENST00000485080 GBP2P32456 591 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-213ENST00000485080 CCR2P41597 374 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 SMYD5Q6GMV2 418 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 WHAMMQ8TF30 809 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 TATDN2Q93075 761 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 C8orf48Q96LL4 319 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 MYRFLQ96LU7 910 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 DNAI2Q9GZS0 605 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 LIMD1Q9UGP4 676 aa18.93■□□□□ 0.62
SREBF1-213ENST00000485080 DCXO43602 365 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 NOL4O94818 638 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-213ENST00000485080 CUL2Q13617 745 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 PTPN21Q16825 1174 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 HS6ST3Q8IZP7 471 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 EHBP1Q8NDI1 1231 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 TRMT2BQ96GJ1 504 aaKnown RBP18.92■□□□□ 0.62
SREBF1-213ENST00000485080 LPIN3Q9BQK8 851 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 B3GNT5Q9BYG0 378 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 GPR88Q9GZN0 384 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 IL21Q9HBE4 155 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.92■□□□□ 0.623e-6■■■□□ 16.8
SREBF1-213ENST00000485080 CISHQ9NSE2 258 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 HMGXB4Q9UGU5 601 aa18.92■□□□□ 0.62
SREBF1-213ENST00000485080 SOBPA7XYQ1 873 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 TRIM66O15016 1216 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 BDNFP23560 247 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 EEF1GP26641 437 aaKnown RBP18.91■□□□□ 0.62
SREBF1-213ENST00000485080 YWHAEP62258 255 aaKnown RBP18.91■□□□□ 0.62
SREBF1-213ENST00000485080 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 MAN2A1Q16706 1144 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 DDR2Q16832 855 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 CAVIN1Q6NZI2 390 aaKnown RBP18.91■□□□□ 0.62
SREBF1-213ENST00000485080 PAQR9Q6ZVX9 377 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 GAREM2Q75VX8 874 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 ACOT1Q86TX2 421 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 FUKQ8N0W3 1084 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 UBR7Q8N806 425 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 SHKBP1Q8TBC3 707 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 KHSRPQ92945 711 aaKnown RBP eCLIP18.91■□□□□ 0.62
SREBF1-213ENST00000485080 TCEAL4Q96EI5 215 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 NT5C1BQ96P26 610 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 TWNKQ96RR1 684 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 KCNK12Q9HB15 430 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 ZNF334Q9HCZ1 680 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-213ENST00000485080 ZMYM5Q9UJ78 669 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 NFE2L3Q9Y4A8 694 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
SREBF1-213ENST00000485080 LETM1O95202 739 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-213ENST00000485080 CEBPBP17676 345 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 WEE1P30291 646 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 CDC25CP30307 473 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 GCNT1Q02742 428 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 TYRO3Q06418 890 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 HTR4Q13639 388 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 CDKAL1Q5VV42 579 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 MTSS1LQ765P7 747 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 FAM200AQ8TCP9 573 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 GIPC2Q8TF65 315 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 JAKMIP2Q96AA8 810 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 HNRNPABQ99729 332 aaKnown RBP18.9■□□□□ 0.62
SREBF1-213ENST00000485080 ARID3AQ99856 593 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 ZNF518BQ9C0D4 1074 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 UXTQ9UBK9 157 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-213ENST00000485080 MUTYHQ9UIF7 546 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 SORCS3Q9UPU3 1222 aa18.9■□□□□ 0.62
SREBF1-213ENST00000485080 SLC38A8A6NNN8 435 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 NRG2O14511 850 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-213ENST00000485080 MYL4P12829 197 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 CD58P19256 250 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 GRIK1P39086 918 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 MTIF2P46199 727 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms