RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 VMP1Q96GC9 406 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ZNF333Q96JL9 665 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 SRGAP2O75044 1071 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 SCTRP47872 440 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 GSPT2Q8IYD1 628 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 CDK20Q8IZL9 346 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 PHB2Q99623 299 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 TLR7Q9NYK1 1049 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 COMMD3-BMI1R4GMX3 469 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 WASLO00401 505 aaPredicted RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 GRIK1P39086 918 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 COMMD2Q86X83 199 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ARHGEF26Q96DR7 871 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 KATNAL1Q9BW62 490 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 CD248Q9HCU0 757 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ALOX15P16050 662 aaPredicted RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 KCNJ6P48051 423 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ATG14Q6ZNE5 492 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 POMGNT2Q8NAT1 580 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 SPATA4Q8NEY3 305 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 SNIP1Q8TAD8 396 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 EEF1AKMT1Q8WVE0 214 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 COX4I2Q96KJ9 171 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 FLT4P35916 1363 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 CAPGP40121 348 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 CCNA1P78396 465 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 PTGES3Q15185 160 aaKnown RBP9.9□□□□□ -0.83
ALMS1-204ENST00000484298 SMYD4Q8IYR2 804 aaPredicted RBP9.9□□□□□ -0.83
ALMS1-204ENST00000484298 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 ZNF112Q9UJU3 913 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 APOL3O95236 402 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 CBX5P45973 191 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 RAB11FIP2Q7L804 512 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 PROSER1Q86XN7 944 aa9.9□□□□□ -0.83
ALMS1-204ENST00000484298 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.83
ALMS1-204ENST00000484298 PHF2O75151 1096 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 RB1P06400 928 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 NFICP08651 508 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 SNRPAP09012 282 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ROR2Q01974 943 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ZFP69Q49AA0 526 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 DCUN1D5Q9BTE7 237 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 GPN1Q9HCN4 374 aaPredicted RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 AASDHPPTQ9NRN7 309 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 DFFAO00273 331 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 DCAF4L1Q3SXM0 396 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 C4orf22Q6V702 233 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 EXOC3L1Q86VI1 746 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 GPD1LQ8N335 351 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 TKTP29401 623 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 IL5RAQ01344 420 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 BARGINQ6ZT62 677 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 CNPP09543 421 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 IL12AP29459 219 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 FAM220AQ7Z4H9 259 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 MAGEB18Q96M61 343 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 PRODHO43272 600 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 KHDRBS3O75525 346 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 HOXB7P09629 217 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 KNOP1Q1ED39 458 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 OTOAQ7RTW8 1153 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 LINC00523Q86TU6 105 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 UBP1Q9NZI7 540 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 SH3TC1Q8TE82 1336 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 LYNP07948 512 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 HPGDP15428 266 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 GTF2E2P29084 291 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 AKAP1Q92667 903 aaKnown RBP eCLIP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 GPKOWQ92917 476 aaPredicted RBP eCLIP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 SEC24BO95487 1268 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 KLHL28Q9NXS3 571 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 SOAT2O75908 522 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 GSTT1P30711 240 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 CDH18Q13634 790 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 C4orf46Q504U0 113 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 C11orf74Q86VG3 221 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 KCTD14Q9BQ13 255 aaPredicted RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ALG13Q9NP73 1137 aaKnown RBP9.89□□□□□ -0.83
ALMS1-204ENST00000484298 SPASTQ9UBP0 616 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ITIH1P19827 911 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 NT5C2P49902 561 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 TMEM270Q6UE05 265 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 ZNF554Q86TJ5 538 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 MMGT1Q8N4V1 131 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 DNAJC11Q9NVH1 559 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 AP3D1O14617 1153 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 KCNN4O15554 427 aa9.89□□□□□ -0.83
ALMS1-204ENST00000484298 MTSS1O43312 755 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms