RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PPP6R2O75170 966 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 IL18RAPO95256 599 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 YEATS4O95619 227 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 LDHAP00338 332 aaKnown RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 C8AP07357 584 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ADRB2P07550 413 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 HARSP12081 509 aaKnown RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 LAMP2P13473 410 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ACPPP15309 386 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ATF2P15336 505 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 LRPAP1P30533 357 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 MCM4P33991 863 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 OR1D2P34982 312 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 STAT6P42226 847 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 NASPP49321 788 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 CLCN5P51795 746 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 OSTNP61366 133 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 PFKPQ01813 784 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 RAD51AP2Q09MP3 1159 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 SMARCB1Q12824 385 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 RESTQ13127 1097 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 PLD1Q13393 1074 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ORC1Q13415 861 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 KARSQ15046 597 aaKnown RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 PTPAQ15257 358 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 SLC10A6Q3KNW5 377 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 GLRA4Q5JXX5 417 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 AXDND1Q5T1B0 1012 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 IQCEQ6IPM2 695 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 SND1Q7KZF4 910 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF720Q7Z2F6 126 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 USP37Q86T82 979 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 CCDC65Q8IXS2 484 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 TCEAL8Q8IYN2 117 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 IQUBQ8NA54 791 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 KCNG4Q8TDN1 519 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 HASPINQ8TF76 798 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF707Q96C28 371 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ASIC4Q96FT7 647 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 SHDQ96IW2 340 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 RTP3Q9BQQ7 232 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 PAAF1Q9BRP4 392 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 MSTO1Q9BUK6 570 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 TMEM206Q9H813 350 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 MRPL44Q9H9J2 332 aaKnown RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 KCNK12Q9HB15 430 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 POLD4Q9HCU8 107 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 OLFML3Q9NRN5 406 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 BLOC1S4Q9NUP1 217 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 GDE1Q9NZC3 331 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 HSFX1Q9UBD0 423 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 WNT16Q9UBV4 365 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 FBXO2Q9UK22 296 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-215ENST00000484203 FBXL21Q9UKT6 434 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 CFAP45Q9UL16 551 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 CDH7Q9ULB5 785 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 DUSP12Q9UNI6 340 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 MTMR6Q9Y217 621 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 C2CD2Q9Y426 696 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 STYXL1Q9Y6J8 313 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 EVPLQ92817 2033 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 F8W810 466 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 M0QZQ0 153 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 SPTLC2O15270 562 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CPNE3O75131 537 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 RFPL2O75678 378 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ABLIM3O94929 683 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 OAZ2O95190 189 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 FGF19O95750 216 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 LRG1P02750 347 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 EDN1P05305 212 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 WEE2P0C1S8 567 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 SRFP11831 508 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 EDN3P14138 238 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 TYMPP19971 482 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 SP100P23497 879 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 COL8A1P27658 744 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 AVPR2P30518 371 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 PNPLA4P41247 253 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 SNRPFP62306 86 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 YWHAHQ04917 246 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 MRPL58Q14197 206 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 MYBPC2Q14324 1141 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 DHX8Q14562 1220 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 STK38Q15208 465 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ZBTB6Q15916 424 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 PLA2G4EQ3MJ16 856 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CTXN3Q4LDR2 81 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 PABPC1LQ4VXU2 614 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CYP4A22Q5TCH4 519 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ADALQ6DHV7 355 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ARMCX5Q6P1M9 558 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 PRSS55Q6UWB4 352 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 WFDC8Q8IUA0 241 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 IL22RA1Q8N6P7 574 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 LINC00301Q8NCQ3 95 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 SLC7A14Q8TBB6 771 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CACTINQ8WUQ7 758 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms