RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 LHX5Q9H2C1 402 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PDCL3Q9H2J4 239 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MRPL47Q9HD33 250 aaKnown RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CISHQ9NSE2 258 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 GTF2IRD1Q9UHL9 959 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM59LQ9UK28 342 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 AMFRQ9UKV5 643 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PCDHGC3Q9UN70 934 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PCDHB4Q9Y5E5 795 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 ALG6Q9Y672 507 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SQORQ9Y6N5 450 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 KAT6AQ92794 2004 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 EVPLQ92817 2033 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC66A2RUB6 948 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TMCO5BA8MYB1 307 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 C1QTNF9BB2RNN3 333 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC188H7C350 402 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PDE2AO00408 941 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 MEFVO15553 781 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TREHO43280 583 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 XPOTO43592 962 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 BUB1BO60566 1050 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SRGAP2O75044 1071 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CAND2O75155 1236 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ERLIN1O75477 346 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 C6orf222P0C671 652 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 C1QTNF9P0C862 333 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ATXN8OSP0DMR3 200 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CXCL8P10145 99 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 HARSP12081 509 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ATF7P17544 494 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PAX3P23760 479 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PMLP29590 882 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ASPAP45381 313 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 NSFP46459 744 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SHC2P98077 582 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 BEX3Q00994 111 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PTP4A2Q12974 167 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 HIC1Q14526 733 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 NAA30Q147X3 362 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM132DQ14C87 1099 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CNGA2Q16280 664 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF699Q32M78 642 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 WDR72Q3MJ13 1102 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC181Q5TID7 509 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 LIN9Q5TKA1 542 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 LMBRD2Q68DH5 695 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 JADE1Q6IE81 842 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SPOPLQ6IQ16 392 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PLEKHA7Q6IQ23 1121 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ZC3H14Q6PJT7 736 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SERINC5Q86VE9 423 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC105Q8IYK2 499 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 LRRC52Q8N7C0 313 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 UBL4BQ8N7F7 174 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CEP120Q8N960 986 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 C1orf127Q8N9H9 656 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM35BQ8NCS4 154 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 LRRN4CLQ8ND94 238 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 DNAJB3Q8WWF6 145 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TSC1Q92574 1164 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ZBTB10Q96DT7 871 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 FAM212AQ96EL1 285 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 KIF12Q96FN5 646 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 HPDLQ96IR7 371 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CPB2Q96IY4 423 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 RAD9AQ99638 391 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 DNAI2Q9GZS0 605 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 FAM49AQ9H0Q0 323 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TRPV6Q9H1D0 765 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 ANKZF1Q9H8Y5 726 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CDHR5Q9HBB8 845 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 OSGEPQ9NPF4 335 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SEPT11Q9NVA2 429 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 DPP3Q9NY33 737 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 TAS2R14Q9NYV8 317 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CNTN3Q9P232 1028 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 CTTNBP2NLQ9P2B4 639 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 NCDNQ9UBB6 729 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 PUF60Q9UHX1 559 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SIX4Q9UIU6 781 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 UBQLN1Q9UMX0 589 aaKnown RBP5.75□□□□□ -1.49
COL17A1-206ENST00000483876 SCINQ9Y6U3 715 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 MYH10P35580 1976 aa5.75□□□□□ -1.49
COL17A1-206ENST00000483876 BPTFQ12830 3046 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 SMIM28A0A1B0GU29 152 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 SRRM3A6NNA2 597 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 M0QZ92 97 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MYO1FO00160 1098 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PIRO00625 290 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 KCNK3O14649 394 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 GPR182O15218 404 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF185O15231 689 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 DDX3YO15523 660 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 RRP9O43818 475 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF623O75123 536 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TBX10O75333 385 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CILPO75339 1184 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CSDE1O75534 798 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms