RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 AADACL2Q6P093 401 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 DCUN1D2Q6PH85 259 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 TMEM110Q86TL2 294 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 RHOT1Q8IXI2 618 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 AP1M1Q9BXS5 423 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 ARFGAP3Q9NP61 516 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 PRDM10Q9NQV6 1147 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.03
CLK3-204ENST00000483723 PODXLO00592 558 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 FSCN2O14926 492 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 HCRTO43612 131 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 PDGFRBP09619 1106 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SELPP16109 830 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 TNFRSF8P28908 595 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 RFC1P35251 1148 aaPredicted RBP14.83□□□□□ -0.04
CLK3-204ENST00000483723 CLCNKBP51801 687 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 GRIK3Q13003 919 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 GPNMBQ14956 572 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 MTFR1Q15390 333 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SEL1L2Q5TEA6 688 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 CD300LGQ6UXG3 332 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SLC24A5Q71RS6 500 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SLC13A5Q86YT5 568 aaPredicted RBP14.83□□□□□ -0.04
CLK3-204ENST00000483723 KATNAL2Q8IYT4 538 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 TMEM86AQ8N2M4 240 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 ANKRD52Q8NB46 1076 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 LINC01599Q8WXQ3 324 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SENP8Q96LD8 212 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 MCEEQ96PE7 176 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SLITRK6Q9H5Y7 841 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 CYLDQ9NQC7 956 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 STIM2Q9P246 746 aa14.83□□□□□ -0.04
CLK3-204ENST00000483723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
CLK3-204ENST00000483723 SART1O43290 800 aaKnown RBP14.82□□□□□ -0.04
CLK3-204ENST00000483723 ERLIN1O75477 346 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 GABBR2O75899 941 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 BFSP2Q13515 415 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 SIX1Q15475 284 aaPredicted RBP14.82□□□□□ -0.04
CLK3-204ENST00000483723 CYP1B1Q16678 543 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 PMF1Q6P1K2 205 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 LRRC8DQ7L1W4 858 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 ZDHHC14Q8IZN3 488 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 TNS4Q8IZW8 715 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 C3orf58Q8NDZ4 430 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 JOSD2Q8TAC2 188 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 SPATA18Q8TC71 538 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 TNIP3Q96KP6 325 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 DEFB118Q96PH6 123 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
CLK3-204ENST00000483723 PLVAPQ9BX97 442 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 HESX1Q9UBX0 185 aa14.82□□□□□ -0.04
CLK3-204ENST00000483723 F8VP50 259 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 RAD51CO43502 376 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 GLI1P08151 1106 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 COL6A1P12109 1028 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 SLC7A5Q01650 507 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 PDE4CQ08493 712 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 TUSC3Q13454 348 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 ACAP1Q15027 740 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 KLHL7Q8IXQ5 586 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 IPO4Q8TEX9 1081 aaKnown RBP14.81□□□□□ -0.04
CLK3-204ENST00000483723 UROC1Q96N76 676 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 LPIN3Q9BQK8 851 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 FTHL17Q9BXU8 183 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 FAM49BQ9NUQ9 324 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 FAM53CQ9NYF3 392 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 CACNG4Q9UBN1 327 aa14.81□□□□□ -0.04
CLK3-204ENST00000483723 E5RJQ4 531 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 GOLGA8SH3BPF8 625 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 TULP2O00295 520 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 SEC31AO94979 1220 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 CCL5P13501 91 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 LHX1P48742 406 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 BCAT1P54687 386 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 SNX16P57768 344 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 PRELID2Q8N945 189 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 EXD1Q8NHP7 514 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 KHSRPQ92945 711 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLK3-204ENST00000483723 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 DDX47Q9H0S4 455 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLK3-204ENST00000483723 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 NBNO60934 754 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 ZMYND10O75800 440 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 POMCP01189 267 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 CYP11A1P05108 521 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 SCNN1AP37088 669 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 MRPS25P82663 173 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 TIGD5Q53EQ6 642 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 PLEKHG4Q58EX7 1191 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 KIAA0319Q5VV43 1072 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 DAB2IPQ5VWQ8 1189 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms