RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
SORT1-205ENST00000483508 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
SORT1-205ENST00000483508 GABBR1Q9UBS5 961 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 ANAPC7Q9UJX3 599 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 STYXL1Q9Y6J8 313 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 SCINQ9Y6U3 715 aa8.61□□□□□ -1.03
SORT1-205ENST00000483508 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 COL4A4P53420 1690 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 HNRNPDLO14979 420 aaKnown RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 TCEA3O75764 348 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 RGS20O76081 388 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 PROSCO94903 275 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SHBGP04278 402 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 CYP1A1P04798 512 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 GSTA1P08263 222 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 CTSHP09668 335 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SMIM10L2AP0DMW4 78 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SMIM10L2BP0DMW5 78 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 KRT5P13647 590 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 CHN1P15882 459 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 KCNA2P16389 499 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 UBA1P22314 1058 aaKnown RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 TBXAS1P24557 533 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 NSFP46459 744 aaKnown RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 LIG4P49917 911 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SP4Q02446 784 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 LMNB2Q03252 620 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 KRT17Q04695 432 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 STRN3Q13033 797 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 NEDD9Q14511 834 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 GPNMBQ14956 572 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 ZNF568Q3ZCX4 644 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 ZACNQ401N2 412 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 XKR3Q5GH77 459 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■□□□□ 8.2
SORT1-205ENST00000483508 SPRED2Q7Z698 418 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 RHOT1Q8IXI2 618 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 ZDHHC14Q8IZN3 488 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 CCHCR1Q8TD31 782 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 BICD1Q96G01 975 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SAMD11Q96NU1 681 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 FNBP1Q96RU3 617 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 SELENOSQ9BQE4 189 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 POLR3FQ9H1D9 316 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 SEMA4AQ9H3S1 761 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 EPHX3Q9H6B9 360 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 UBE2ZQ9H832 354 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 JPH1Q9HDC5 661 aaPredicted RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 INTS9Q9NV88 658 aaKnown RBP8.6□□□□□ -1.03
SORT1-205ENST00000483508 SLC9A2Q9UBY0 812 aa8.6□□□□□ -1.03
SORT1-205ENST00000483508 KAT6AQ92794 2004 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 CUL9Q8IWT3 2517 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 TLDC2A0PJX2 215 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 TMEM150BA6NC51 233 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 CLDN3O15551 220 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 TREHO43280 583 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 ZNF862O60290 1169 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 LPXNO60711 386 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 DNAJC8O75937 253 aaPredicted RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 HLA-DRAP01903 254 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 C4BPAP04003 597 aaKnown RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 LGALS2P05162 132 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 DLATP10515 647 aaKnown RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 ATF2P15336 505 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 KCNA5P22460 613 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 HNRNPH1P31943 449 aaKnown RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 PLA2G5P39877 138 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 PIK3CAP42336 1068 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 NAMPTP43490 491 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 AP3M2P53677 418 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 SP2Q02086 613 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 PRKCEQ02156 737 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 AUHQ13825 339 aaKnown RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 CCNG2Q16589 344 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 TRIM71Q2Q1W2 868 aaKnown RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 PLEKHG4Q58EX7 1191 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 ANKRD20A8PQ5CZ79 823 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 ABHD15Q6UXT9 468 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 MON1BQ7L1V2 547 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 SERINC5Q86VE9 423 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 RELL1Q8IUW5 271 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 CCDC13Q8IYE1 715 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 KATNAL2Q8IYT4 538 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 RIBC1Q8N443 379 aaPredicted RBP8.59□□□□□ -1.03
SORT1-205ENST00000483508 ATL2Q8NHH9 583 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 EXD1Q8NHP7 514 aa8.59□□□□□ -1.03
SORT1-205ENST00000483508 WNT8BQ93098 351 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms