RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 SLC26A4O43511 780 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 STK10O94804 968 aaKnown RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 HMGB1P09429 215 aaKnown RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 IQCF3P0C7M6 154 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 UBTFL1P0CB47 393 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 AVPR2P30518 371 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ERVK-21P61565 698 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 GABREP78334 506 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 SLC25A3Q00325 362 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ADAM15Q13444 863 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 CLUL1Q15846 466 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 FSCN1Q16658 493 aaKnown RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 HERC4Q5GLZ8 1057 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 CATSPEREQ5SY80 951 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ARMCX2Q7L311 632 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 OVCH1Q7RTY7 1134 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 BMP8AQ7Z5Y6 402 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 SGMS1Q86VZ5 419 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 WDR63Q8IWG1 891 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 MSL3Q8N5Y2 521 aaKnown RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 AGAP2Q99490 1192 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 RAD9AQ99638 391 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 CCDC113Q9H0I3 377 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ALDH8A1Q9H2A2 487 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ZNF703Q9H7S9 590 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ADAMTS5Q9UNA0 930 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 B3GALT1Q9Y5Z6 326 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ASTN1O14525 1302 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TNKSO95271 1327 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 A0A087X1B8 175 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 MED19A0JLT2 244 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 LINC01553A4QN01 128 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 CAPN14A8MX76 684 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 WDR46O15213 610 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 MYL3P08590 195 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 UQCRFS1P1P0C7P4 283 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 MEOX1P50221 254 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 VCPP55072 806 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 ANTXR2P58335 489 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 ADAM8P78325 824 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 DEFB103AP81534 67 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 ATP2C1P98194 919 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 CNTN2Q02246 1040 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 RIN1Q13671 783 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TCEAL5Q5H9L2 206 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 FAM47CQ5HY64 1035 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TTC39AQ5SRH9 613 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 FAM83BQ5T0W9 1011 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TMEM63BQ5T3F8 832 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 GRAMD4Q6IC98 578 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 SNRNP48Q6IEG0 339 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 Q6ZRM9 215 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TLK2Q86UE8 772 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TMPRSS6Q8IU80 811 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 D2HGDHQ8N465 521 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 GSTCDQ8NEC7 633 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 FOXRED1Q96CU9 486 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 PABPC5Q96DU9 382 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 MRPL38Q96DV4 380 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 DYNLL2Q96FJ2 89 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 C17orf80Q9BSJ5 609 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 SEZ6LQ9BYH1 1024 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 NELFAQ9H3P2 528 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 VCPKMTQ9H867 229 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 PIH1D3Q9NQM4 214 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 PDGFCQ9NRA1 345 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 KCNH7Q9NS40 1196 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 NDOR1Q9UHB4 597 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 CTNNA3Q9UI47 895 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 TMX2Q9Y320 296 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 CTDP1Q9Y5B0 961 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 DDX49Q9Y6V7 483 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 GBF1Q92538 1859 aa4.23□□□□□ -1.73
LRCH3-217ENST00000483442 ZNFX1Q9P2E3 1918 aaKnown RBP4.23□□□□□ -1.73
LRCH3-217ENST00000483442 CACNA1GO43497 2377 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ZDBF2Q9HCK1 2354 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 C2orf78A6NCI8 922 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 FOXP2O15409 715 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 MBTPS2O43462 519 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ZBED4O75132 1171 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 IDH1O75874 414 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 BAIAP3O94812 1187 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 EEF2P13639 858 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 AKR1B1P15121 316 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 RFC2P35250 354 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 COPB2P35606 906 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 SCNN1GP51170 649 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 WDR5P61964 334 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ICA1Q05084 483 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 GABPAQ06546 454 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 GPM6BQ13491 265 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 BFSP2Q13515 415 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 PTPROQ16827 1216 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 CCDC184Q52MB2 194 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 CCDC158Q5M9N0 1113 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 IQSEC1Q6DN90 963 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 TMEM179Q6ZVK1 233 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms