RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 DDX1Q92499 740 aaKnown RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 DHX38Q92620 1227 aaKnown RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 PCDHGB4Q9UN71 923 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ZNF148Q9UQR1 794 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 PCDHGB5Q9Y5G0 923 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 BTBD19C9JJ37 291 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 MEIS2O14770 477 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 LIASO43766 372 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 YY1P25490 414 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 VARSP26640 1264 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 GSTO1P78417 241 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CETN1Q12798 172 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CYLC2Q14093 348 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 DNAL1Q4LDG9 190 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ODR4Q5SWX8 454 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 RNASEH2BQ5TBB1 312 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 AAGABQ6PD74 315 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CEP70Q8NHQ1 597 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ZFP28Q8NHY6 868 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 DCAKDQ8WVC6 231 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SHC3Q92529 594 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 USP6NLQ92738 828 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 RBM38Q9H0Z9 239 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ZNF395Q9H8N7 513 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 STRIP2Q9ULQ0 834 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ARHGAP42A6NI28 874 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 PI4K2BG5E9Z4 385 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 STIP1P31948 543 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 RPL5P46777 297 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SLC25A3Q00325 362 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CCNIQ14094 377 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 QRICH1Q2TAL8 776 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SERAC1Q96JX3 654 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 SLX1AQ9BQ83 275 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 DHRS4Q9BTZ2 278 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 CCDC106Q9BWC9 280 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 GRIP2Q9C0E4 1043 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 PPCSQ9HAB8 311 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ARHGEF38Q9NXL2 777 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 USTQ9Y2C2 406 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 TDRKHQ9Y2W6 561 aaKnown RBP12.37□□□□□ -0.43
VTI1A-205ENST00000483122 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
VTI1A-205ENST00000483122 ZNF189O75820 626 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 OATP04181 439 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 KITP10721 976 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 FOLH1Q04609 750 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 UBAP2LQ14157 1087 aaKnown RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MORF4L2Q15014 288 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TRIP10Q15642 601 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MYLK3Q32MK0 819 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 ATP13A4Q4VNC1 1196 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CES4AQ5XG92 561 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 SLC9A9Q8IVB4 645 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 DIS3LQ8TF46 1054 aaKnown RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 HSPBAP1Q96EW2 488 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 GCNAQ96QF7 691 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MECRQ9BV79 373 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CNTN3Q9P232 1028 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 UBE4BO95155 1302 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MYOCOSA0A1B0GUC4 107 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TBX3O15119 743 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CHMP2AO43633 222 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 AP1G1O43747 822 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CLPTM1O96005 669 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TM4SF1P30408 202 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 CPOXP36551 454 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 NFIXQ14938 502 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TLR1Q15399 786 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MOXD1Q6UVY6 613 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 C3orf62Q6ZUJ4 267 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 RNF168Q8IYW5 571 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms