RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CRYBG2Q8N1P7 616 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 NXPE3Q969Y0 559 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 MYADMQ96S97 322 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 NT5C1AQ9BXI3 368 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 GDE1Q9NZC3 331 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 TRIM66O15016 1216 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CILPO75339 1184 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CSH1P0DML2 217 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CSH2P0DML3 217 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 MYL4P12829 197 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 ALADP13716 330 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 BDNFP23560 247 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CDR1P51861 262 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CCDC142Q17RM4 750 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 HS6ST3Q8IZP7 471 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 ITFG1Q8TB96 612 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 FGF13Q92913 245 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 TATDN2Q93075 761 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 LPIN3Q9BQK8 851 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 IGSF9Q9P2J2 1179 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 LIMD1Q9UGP4 676 aa17.66■□□□□ 0.42
HMGN1-214ENST00000482733 CD58P19256 250 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 ANXA13P27216 316 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 GRIK1P39086 918 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 CUL2Q13617 745 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 MAN2A1Q16706 1144 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 DDR2Q16832 855 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 SLC5A9Q2M3M2 681 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 SKOR2Q2VWA4 1001 aaPredicted RBP17.65■□□□□ 0.42
HMGN1-214ENST00000482733 ACOT1Q86TX2 421 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 TMC8Q8IU68 726 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 SCN4BQ8IWT1 228 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 NPAS3Q8IXF0 933 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 EHBP1Q8NDI1 1231 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 GIPC2Q8TF65 315 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 SPATA17Q96L03 361 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 C8orf48Q96LL4 319 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 LRRC3Q9BY71 257 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 B3GNT5Q9BYG0 378 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 GPR88Q9GZN0 384 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 NAT10Q9H0A0 1025 aaKnown RBP17.65■□□□□ 0.42
HMGN1-214ENST00000482733 CISHQ9NSE2 258 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 EHD2Q9NZN4 543 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 NFE2L3Q9Y4A8 694 aa17.65■□□□□ 0.42
HMGN1-214ENST00000482733 DCXO43602 365 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 EEF1GP26641 437 aaKnown RBP17.64■□□□□ 0.41
HMGN1-214ENST00000482733 CDC25CP30307 473 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 TYRO3Q06418 890 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 PTPN21Q16825 1174 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 MTSS1LQ765P7 747 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 LMO3Q8TAP4 145 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 GCNAQ96QF7 691 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 MED10Q9BTT4 135 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 UXTQ9UBK9 157 aaPredicted RBP17.64■□□□□ 0.41
HMGN1-214ENST00000482733 HMGXB4Q9UGU5 601 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 MUTYHQ9UIF7 546 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 DENND4AQ7Z401 1863 aa17.64■□□□□ 0.41
HMGN1-214ENST00000482733 BDP1A6H8Y1 2624 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 MUC3AQ02505 3323 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 C2orf16Q68DN1 1984 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 GTPBP10A4D1E9 387 aaKnown RBP17.63■□□□□ 0.41
HMGN1-214ENST00000482733 SLC38A8A6NNN8 435 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 NOL4O94818 638 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 CEBPBP17676 345 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 GABRR2P28476 465 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 CCR2P41597 374 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 GPR15P49685 360 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 GCNT1Q02742 428 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 LRMPQ12912 555 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 GBP6Q6ZN66 633 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 WHAMMQ8TF30 809 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 ING5Q8WYH8 240 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 TCEAL4Q96EI5 215 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 TRMT2BQ96GJ1 504 aaKnown RBP17.63■□□□□ 0.41
HMGN1-214ENST00000482733 SMARCD1Q96GM5 515 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 FAM81BQ96LP2 452 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 MYRFLQ96LU7 910 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 TUBGCP2Q9BSJ2 902 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 ZNF518BQ9C0D4 1074 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 KCNK12Q9HB15 430 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 SAMSN1Q9NSI8 373 aaKnown RBP17.63■□□□□ 0.41
HMGN1-214ENST00000482733 ZMYM5Q9UJ78 669 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 SORCS3Q9UPU3 1222 aa17.63■□□□□ 0.41
HMGN1-214ENST00000482733 A0A1W2PRU2 124 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 KCNJ18B7U540 433 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ANHXE9PGG2 379 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 MOSPD3O75425 235 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 HMGA1P17096 107 aaKnown RBP17.62■□□□□ 0.41
HMGN1-214ENST00000482733 MYL5Q02045 173 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ORC1Q13415 861 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 MTMR3Q13615 1198 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 KCNJ12Q14500 433 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 VWA3BQ502W6 1294 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ARHGAP15Q53QZ3 475 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 TCP11X2Q5H9J9 407 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 SDHAF4Q5VUM1 108 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 C11orf57Q6ZUT1 292 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms