RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 C10orf82Q8WW14 230 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 USP6NLQ92738 828 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 SYNJ2BP-COX16A0A087WUM0 186 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 KBTBD13C9JR72 458 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 TBX10O75333 385 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SNUPNO95149 360 aaKnown RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 T-ENOLP0DO92 83 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CCNB1P14635 433 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 AMPD1P23109 780 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 AQP5P55064 265 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CDH6P55285 790 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 MSS51Q4VC12 460 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 NPNTQ6UXI9 565 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 RINLQ6ZS11 566 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 ANO5Q75V66 913 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SDCCAG8Q86SQ7 713 aaPredicted RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 RASSF3Q86WH2 238 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 MTMR12Q9C0I1 747 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 COX16Q9P0S2 106 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 TCRBV7S3A2A0A539 114 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CYB561D2O14569 222 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 TP73O15350 636 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 GSC2O15499 205 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 PDE5AO76074 875 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SLC45A4Q5BKX6 768 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 ASAP3Q8TDY4 903 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 INPP5DQ92835 1189 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CCNE2O96020 404 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CD48P09326 243 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 FGFR1P11362 822 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SP100P23497 879 aaPredicted RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 NOMO3P69849 1222 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 PRKCEQ02156 737 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 SLC34A1Q06495 639 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 MORF4L2Q15014 288 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 PARP6Q2NL67 630 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 STRIP1Q5VSL9 837 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 CRLF3Q8IUI8 442 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 DDX1Q92499 740 aaKnown RBP13.31□□□□□ -0.28
VPS52-218ENST00000482399 MIPEPQ99797 713 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 TXNDC16Q9P2K2 825 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 MYPNQ86TC9 1320 aa13.31□□□□□ -0.28
VPS52-218ENST00000482399 PSMG1O95456 288 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 UNGP13051 313 aaPredicted RBP13.3□□□□□ -0.28
VPS52-218ENST00000482399 SKIV2L2P42285 1042 aaKnown RBP13.3□□□□□ -0.28
VPS52-218ENST00000482399 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
VPS52-218ENST00000482399 WASHC2DQ5SRD0 308 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 ENOSF1Q7L5Y1 443 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 PPIL6Q8IXY8 311 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.3□□□□□ -0.28
VPS52-218ENST00000482399 NDUFAF2Q8N183 169 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 ZNF516Q92618 1163 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 TELO2Q9Y4R8 837 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 CFLARO15519 480 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 KCNN4O15554 427 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 TRPA1O75762 1119 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 ALADP13716 330 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
VPS52-218ENST00000482399 MYL6P60660 151 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 TATDN1Q6P1N9 297 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 MAP4K3Q8IVH8 894 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 KATNAL2Q8IYT4 538 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 SYTL5Q8TDW5 730 aaPredicted RBP13.3□□□□□ -0.28
VPS52-218ENST00000482399 TJP2Q9UDY2 1190 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 LRCH1Q9Y2L9 728 aa13.3□□□□□ -0.28
VPS52-218ENST00000482399 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 RPL22P35268 128 aaKnown RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 NEK3P51956 506 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 CDH8P55286 799 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 PDE1BQ01064 536 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 GCNT1Q02742 428 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 PSMD6Q15008 389 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS52-218ENST00000482399 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 NETO2Q8NC67 525 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 TRIM56Q9BRZ2 755 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms