RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
CCDC78-212ENST00000482152 SDCBP2Q9H190 292 aa17.4■□□□□ 0.38
CCDC78-212ENST00000482152 UXTQ9UBK9 157 aaPredicted RBP17.4■□□□□ 0.38
CCDC78-212ENST00000482152 SOBPA7XYQ1 873 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 ANHXE9PGG2 379 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 ATF6P18850 670 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 SP100P23497 879 aaPredicted RBP17.39■□□□□ 0.37
CCDC78-212ENST00000482152 CDC25CP30307 473 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 NDST1P52848 882 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 MDH1BQ5I0G3 518 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 MYLPFQ96A32 169 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 TRMT2BQ96GJ1 504 aaKnown RBP17.39■□□□□ 0.37
CCDC78-212ENST00000482152 CNOT6LQ96LI5 555 aaKnown RBP17.39■□□□□ 0.37
CCDC78-212ENST00000482152 C8orf48Q96LL4 319 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 MYRFLQ96LU7 910 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 KCNK12Q9HB15 430 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 NME7Q9Y5B8 376 aa17.39■□□□□ 0.37
CCDC78-212ENST00000482152 DENND4AQ7Z401 1863 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 HCRTO43612 131 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 CILPO75339 1184 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 SOAT2O75908 522 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 MYL4P12829 197 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 BDNFP23560 247 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 ANXA13P27216 316 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 GRIK1P39086 918 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 RAP1GAPP47736 663 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 TDGQ13569 410 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 MTMR3Q13615 1198 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 STX1AQ16623 288 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 SLC5A9Q2M3M2 681 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 TMC8Q8IU68 726 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 IRF2BP1Q8IU81 584 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 NPAS3Q8IXF0 933 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 EDAQ92838 391 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 FAM81BQ96LP2 452 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 NT5C1BQ96P26 610 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 C1QTNF1Q9BXJ1 281 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 DPEP3Q9H4B8 488 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 C2orf16Q68DN1 1984 aa17.38■□□□□ 0.37
CCDC78-212ENST00000482152 GTPBP10A4D1E9 387 aaKnown RBP17.37■□□□□ 0.37
CCDC78-212ENST00000482152 NOL4O94818 638 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 WEE1P30291 646 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 MTIF2P46199 727 aaKnown RBP17.37■□□□□ 0.37
CCDC78-212ENST00000482152 CUL2Q13617 745 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 DDR2Q16832 855 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 ARHGAP15Q53QZ3 475 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 ACOT1Q86TX2 421 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 SCN4BQ8IWT1 228 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 GIPC2Q8TF65 315 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 TATDN2Q93075 761 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 B3GNT5Q9BYG0 378 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
CCDC78-212ENST00000482152 CISHQ9NSE2 258 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 KIAA1257Q9ULG3 409 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 C5orf42Q9H799 3197 aa17.37■□□□□ 0.37
CCDC78-212ENST00000482152 SLC38A8A6NNN8 435 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 HMGA1P17096 107 aaKnown RBP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 DDX6P26196 483 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 EEF1GP26641 437 aaKnown RBP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 CCR2P41597 374 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 PPP3CCP48454 512 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 ZXDAP98168 799 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 SKOR2Q2VWA4 1001 aaPredicted RBP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 ELMO3Q96BJ8 720 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 TCEAL4Q96EI5 215 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 MCRS1Q96EZ8 462 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 SMARCD1Q96GM5 515 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 TMEM176AQ96HP8 235 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 HNRNPABQ99729 332 aaKnown RBP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 ATXN3LQ9H3M9 355 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 TRPV4Q9HBA0 871 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC78-212ENST00000482152 COMMD8Q9NX08 183 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 TMEM63CQ9P1W3 806 aa17.36■□□□□ 0.37
CCDC78-212ENST00000482152 TTC28Q96AY4 2481 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 LRRN2O75325 713 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 MOSPD3O75425 235 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 ECI2O75521 394 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 CEBPBP17676 345 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 CD58P19256 250 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 GABRR2P28476 465 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 GCNT1Q02742 428 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 HTR4Q13639 388 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 MAN2A1Q16706 1144 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 GBP6Q6ZN66 633 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 DENND5BQ6ZUT9 1274 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 ENOSF1Q7L5Y1 443 aa17.35■□□□□ 0.37
CCDC78-212ENST00000482152 SLC44A3Q8N4M1 653 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms