RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 LAMA3Q16787 3333 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 LRRC53A6NM62 1247 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 CYP26A1O43174 497 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 ATP2C2O75185 946 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 GFPT2O94808 682 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 KRT9P35527 623 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 MAGEA8P43361 318 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 ARPP19P56211 112 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 PSMC1P62191 440 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 ARID5AQ03989 594 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 GLYCTKQ8IVS8 523 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 GPR65Q8IYL9 337 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 FAM71AQ8IYT1 594 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 SLC4A11Q8NBS3 891 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 SYT15Q9BQS2 421 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 OXCT2Q9BYC2 517 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 ELOVL4Q9GZR5 314 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 NGRNQ9NPE2 291 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
HPS4-212ENST00000481910 MTRRQ9UBK8 725 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 MYO6Q9UM54 1294 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 BACE2Q9Y5Z0 518 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 CDY1Q9Y6F8 540 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 OR6C75A6NL08 312 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 TBC1D4O60343 1298 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 LPXNO60711 386 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 LILRB3O75022 631 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 OR1D2P34982 312 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 IRS1P35568 1242 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 TSPY1Q01534 308 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 CREMQ03060 361 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 PTK2Q05397 1052 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 PDE12Q6L8Q7 609 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 CRYBG2Q8N1P7 616 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
HPS4-212ENST00000481910 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 TMEM209Q96SK2 561 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 CLSTN3Q9BQT9 956 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 GTF3C4Q9UKN8 822 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 IRAK3Q9Y616 596 aa12.31□□□□□ -0.44
HPS4-212ENST00000481910 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 MYBPHLA2RUH7 354 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
HPS4-212ENST00000481910 PAEPP09466 180 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 OR4Q2P0C623 313 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 CPB1P15086 417 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 CD19P15391 556 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 CDR1P51861 262 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 BPIFB4P59827 614 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 INTS6LQ5JSJ4 861 aaKnown RBP12.3□□□□□ -0.44
HPS4-212ENST00000481910 SLC8B1Q6J4K2 584 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 LRRTM3Q86VH5 581 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
HPS4-212ENST00000481910 C12orf29Q8N999 325 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 LMAN2LQ9H0V9 348 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
HPS4-212ENST00000481910 ACP6Q9NPH0 428 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 FNIP2Q9P278 1114 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
HPS4-212ENST00000481910 C2orf71A6NGG8 1288 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 FSCN2O14926 492 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 TEX28O15482 410 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 ADAM12O43184 909 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 CALCAP01258 141 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
HPS4-212ENST00000481910 ZNF132P52740 706 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
HPS4-212ENST00000481910 PTPROQ16827 1216 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 TSR1Q2NL82 804 aaKnown RBP12.29□□□□□ -0.44
HPS4-212ENST00000481910 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
HPS4-212ENST00000481910 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 SLC47A2Q86VL8 602 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 OR8K1Q8NGG5 319 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms