RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 C2CD6Q53TS8 623 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 ZNF618Q5T7W0 954 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 CPNE8Q86YQ8 564 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 MCEEQ96PE7 176 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 TRIM51Q9BSJ1 452 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 NT5C1AQ9BXI3 368 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 MTRF1LQ9UGC7 380 aaKnown RBP16.64■□□□□ 0.25
RXRA-202ENST00000481739 UBQLN1Q9UMX0 589 aaKnown RBP16.64■□□□□ 0.25
RXRA-202ENST00000481739 CITO14578 2027 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 GOLGA6CA6NDK9 693 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 A6NNZ2 444 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GPR182O15218 404 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GAS8O95995 478 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GOLGA6DP0CG33 693 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 HSPA1AP0DMV8 641 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 HSPA1BP0DMV9 641 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 GHRP10912 638 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GABRB2P47870 512 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 TRIM71Q2Q1W2 868 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 TUBB8Q3ZCM7 444 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 PTPN20Q4JDL3 420 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 DENND1BQ6P3S1 775 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 TMC3Q7Z5M5 1100 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 ZNF333Q96JL9 665 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 ZIM3Q96PE6 472 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 DPH5Q9H2P9 285 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 FAM204AQ9H8W3 233 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GOLGA6AQ9NYA3 693 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 HES2Q9Y543 173 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 GOLGA6L10A6NI86 522 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 O00370 1275 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 CD52P31358 61 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 PNPLA4P41247 253 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 CDH8P55286 799 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 SNX16P57768 344 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 RPL7AP62424 266 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 LMNB2Q03252 620 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 CCNG2Q16589 344 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 FBXO47Q5MNV8 452 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 LLGL2Q6P1M3 1020 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 TTC27Q6P3X3 843 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 LCLAT1Q6UWP7 414 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 ALKAL1Q6UXT8 129 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 PHLDB2Q86SQ0 1253 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 DDX42Q86XP3 938 aaKnown RBP eCLIP16.63■□□□□ 0.25
RXRA-202ENST00000481739 CCDC50Q8IVM0 306 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 OSBPL8Q9BZF1 889 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 TSPYL1Q9H0U9 437 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 NXF3Q9H4D5 531 aaKnown RBP16.63■□□□□ 0.25
RXRA-202ENST00000481739 SYNCQ9H7C4 482 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 PRDM10Q9NQV6 1147 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 ZDHHC18Q9NUE0 388 aa16.63■□□□□ 0.25
RXRA-202ENST00000481739 PPFIA2O75334 1257 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 KRT3P12035 628 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 CKBP12277 381 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
RXRA-202ENST00000481739 ATN1P54259 1190 aaPredicted RBP16.62■□□□□ 0.25
RXRA-202ENST00000481739 TAS2R40P59535 323 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
RXRA-202ENST00000481739 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 AGO3Q9H9G7 860 aaKnown RBP16.62■□□□□ 0.25
RXRA-202ENST00000481739 PADI3Q9ULW8 664 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 EFR3BQ9Y2G0 817 aa16.62■□□□□ 0.25
RXRA-202ENST00000481739 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 CAND2O75155 1236 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 MICAL2O94851 1124 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 KRT7P08729 469 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 KCNE1P15382 129 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 CYP3A5P20815 502 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 AKAP5P24588 427 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 HSD17B3P37058 310 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 CDK7P50613 346 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 NDST1P52848 882 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 PSMC1P62191 440 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 LPIN1Q14693 890 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 ODF2Q5BJF6 829 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 FAM26DQ5JW98 314 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 ATL2Q8NHH9 583 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 HEXIM2Q96MH2 286 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 TWNKQ96RR1 684 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 OSBPL7Q9BZF2 842 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 NEUROG2Q9H2A3 272 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 CHST12Q9NRB3 414 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 WHRNQ9P202 907 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 M0QYV0 167 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms