RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CDH9Q9ULB4 789 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 GPR179Q6PRD1 2367 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
SQSTM1-207ENST00000481335 SPECC1L-ADORA2AF8WAN1 911 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 TGFB1I1O43294 461 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 PRAMEF12O95522 483 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 WARSP23381 471 aaKnown RBP13□□□□□ -0.33
SQSTM1-207ENST00000481335 PDE6CP51160 858 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 AMPD2Q01433 879 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 SOWAHAQ2M3V2 549 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 ITPRIPL2Q3MIP1 535 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 ERMP1Q7Z2K6 904 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 TMEM150AQ86TG1 271 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 MON1AQ86VX9 555 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 SPEM1Q8N4L4 309 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 FSIP1Q8NA03 581 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 GLIS3Q8NEA6 775 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 OR5B17Q8NGF7 314 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 GIPC2Q8TF65 315 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 EXOC4Q96A65 974 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 CGRRF1Q99675 332 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 PI4K2AQ9BTU6 479 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 SLC46A2Q9BY10 475 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 TDP1Q9NUW8 608 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 USP25Q9UHP3 1055 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 PCDHA7Q9UN72 937 aa13□□□□□ -0.33
SQSTM1-207ENST00000481335 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 TACC1O75410 805 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 TDGF1P13385 188 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 ATICP31939 592 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 AP3M2P53677 418 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 CYP24A1Q07973 514 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 PSMD2Q13200 908 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 KIAA1958Q8N8K9 716 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 KBTBD7Q8WVZ9 684 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 SYT15Q9BQS2 421 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 GTF3C4Q9UKN8 822 aa12.99□□□□□ -0.33
SQSTM1-207ENST00000481335 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 TRIM66O15016 1216 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 DLATP10515 647 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 TCF3P15923 654 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 TNNI1P19237 187 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 CYP2F1P24903 491 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 HOXA6P31267 233 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 CNR2P34972 360 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 ID4P47928 161 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 CXCL12P48061 93 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 PPP3CCP48454 512 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 FAM160A1Q05DH4 1040 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 CCINQ13939 588 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 LMBRD2Q68DH5 695 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 USP13Q92995 863 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 LRRC3BQ96PB8 259 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 HINFPQ9BQA5 517 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 MAGEC2Q9UBF1 373 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 MAGED2Q9UNF1 606 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 SMG5Q9UPR3 1016 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-207ENST00000481335 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 TADA3O75528 432 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 USP17L7P0C7H9 530 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 CYP2J2P51589 502 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 TNNC1P63316 161 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 RUNX3Q13761 415 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 DDR2Q16832 855 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 MYCBPAPQ8TBZ2 947 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 MYLPFQ96A32 169 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 NCDNQ9UBB6 729 aa12.97□□□□□ -0.33
SQSTM1-207ENST00000481335 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 TRDMT1O14717 391 aaKnown RBP12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 CLIC2O15247 247 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 ACTN4O43707 911 aaKnown RBP12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 EXOC3O60645 756 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 KIF20AO95235 890 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 SDHBP21912 280 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 CMA1P23946 247 aa12.96□□□□□ -0.33
SQSTM1-207ENST00000481335 ANXA13P27216 316 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms