RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ACAP1Q15027 740 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 DLK2Q6UY11 383 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 TRAIPQ9BWF2 469 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 POMCP01189 267 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 GRIK3Q13003 919 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 IZUMO3Q5VZ72 239 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 PPP1R12CQ9BZL4 782 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 TXNRD2Q9NNW7 524 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 SEC31AO94979 1220 aaKnown RBP20.19■□□□□ 0.82
CCM2-214ENST00000481194 HARS2P49590 506 aaKnown RBP20.19■□□□□ 0.82
CCM2-214ENST00000481194 PAPD7Q5XG87 772 aaKnown RBP20.19■□□□□ 0.82
CCM2-214ENST00000481194 UHMK1Q8TAS1 419 aaKnown RBP20.19■□□□□ 0.82
CCM2-214ENST00000481194 FBXO44Q9H4M3 255 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 ZNF862O60290 1169 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 TSPAN16Q9UKR8 245 aa20.19■□□□□ 0.82
CCM2-214ENST00000481194 MT-ND3P03897 115 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ELNP15502 786 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 HNRNPH3P31942 346 aaKnown RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 APLP1P51693 650 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 PMS2P54278 862 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 SEPT6Q14141 434 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ITIH5Q86UX2 942 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 FAM71AQ8IYT1 594 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ADAMTS5Q9UNA0 930 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 MAP2K2P36507 400 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ARSEP51690 589 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 PRKCZQ05513 592 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 RAD51Q06609 339 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 LAMB3Q13751 1172 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ATPAF2Q8N5M1 289 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 BSNDQ8WZ55 320 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 A0A087WUV0 522 aaPredicted RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 MICAL2O94851 1124 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 NFICP08651 508 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 SCYL1Q96KG9 808 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 CAPS2Q9BXY5 557 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 KRT37O76014 449 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ARF4P18085 180 aaPredicted RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 IRX5P78411 483 aaPredicted RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 PTK7Q13308 1070 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ZNF235Q14590 738 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 KCNA10Q16322 511 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 ZNF449Q6P9G9 518 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 FAXDC2Q96IV6 333 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 FRMD8Q9BZ67 464 aaPredicted RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 TRPC7Q9HCX4 862 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 BFARQ9NZS9 450 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 PAK5Q9P286 719 aa20.18■□□□□ 0.82
CCM2-214ENST00000481194 FARP1Q9Y4F1 1045 aaPredicted RBP20.18■□□□□ 0.82
CCM2-214ENST00000481194 S100BP04271 92 aaPredicted RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 BYSLQ13895 437 aaKnown RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 ZCWPW2Q504Y3 356 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 TBCBQ99426 244 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 BTNL10A8MVZ5 291 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 PEX10O60683 326 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 CAND2O75155 1236 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 KCNMA1Q12791 1236 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 TMED2Q15363 201 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 ATP11CQ8NB49 1132 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 HINFPQ9BQA5 517 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 OLA1Q9NTK5 396 aaKnown RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 C22orf31O95567 290 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 ASGR1P07306 291 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 PAN2Q504Q3 1202 aaKnown RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 ZNF662Q6ZS27 426 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 SLC13A5Q86YT5 568 aaPredicted RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 EXD1Q8NHP7 514 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 GAD1Q99259 594 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 PFDN4Q9NQP4 134 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 TLK1Q9UKI8 766 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 PI4K2BG5E9Z4 385 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 CYP3A5P20815 502 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 RRM1P23921 792 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 MBTD1Q05BQ5 628 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 EFHBQ8N7U6 833 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 SHC3Q92529 594 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 FBXO32Q969P5 355 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 SRRDQ9UH36 339 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 GRAP2O75791 330 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 ACO1P21399 889 aaKnown RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 C10orf120Q5SQS8 335 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 ACTRT1Q8TDG2 376 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 PPCSQ9HAB8 311 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 DMAP1Q9NPF5 467 aaPredicted RBP20.17■□□□□ 0.82
CCM2-214ENST00000481194 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCM2-214ENST00000481194 SH3BP1Q9Y3L3 701 aa20.17■□□□□ 0.82
CCM2-214ENST00000481194 DFFAO00273 331 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 TRIM66O15016 1216 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 RTN3O95197 1032 aaPredicted RBP20.16■□□□□ 0.82
CCM2-214ENST00000481194 SELPP16109 830 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 MEI1Q5TIA1 1274 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 RAB44Q7Z6P3 723 aaPredicted RBP20.16■□□□□ 0.82
CCM2-214ENST00000481194 YAF2Q8IY57 180 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 TOP6BLQ8N6T0 577 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 AKAP11Q9UKA4 1901 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 ADAMTS3O15072 1205 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms