RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 CHMP4CQ96CF2 233 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 PGBD1Q96JS3 809 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 TRIB1Q96RU8 372 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 WDCPQ9H6R7 721 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 CTTNBP2NLQ9P2B4 639 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 SLC17A6Q9P2U8 582 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 SLC45A2Q9UMX9 530 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 PCDHA3Q9Y5H8 950 aa6.68□□□□□ -1.34
COMMD3-212ENST00000479958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.68□□□□□ -1.34
COMMD3-212ENST00000479958 ZNF142P52746 1687 aaPredicted RBP6.68□□□□□ -1.34
COMMD3-212ENST00000479958 POLRMTO00411 1230 aaKnown RBP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 FYB1O15117 783 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 MPPED1O15442 326 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 SUN1O94901 812 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 CHEK2O96017 543 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 GJB1P08034 283 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 HSPA2P54652 639 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 ANAPC15P60006 121 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 EXOSC10Q01780 885 aaKnown RBP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 TMEM240Q5SV17 173 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 KAZNQ674X7 775 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 SYCE2Q6PIF2 218 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 USP45Q70EL2 814 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 NSUN7Q8NE18 718 aaKnown RBP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 HSPBAP1Q96EW2 488 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 FBXL20Q96IG2 436 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 PDLIM2Q96JY6 352 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 KMT5AQ9NQR1 393 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 FOXJ2Q9P0K8 574 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 SPATA31A6Q5VVP1 1343 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 PPIP5K1Q6PFW1 1433 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 ZRANB2O95218 330 aaKnown RBP eCLIP6.67□□□□□ -1.34
COMMD3-212ENST00000479958 POU2F2P09086 479 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 GATA3P23771 443 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 AKAP5P24588 427 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 CACNA2D1P54289 1103 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 CCDC157Q569K6 752 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 TAPT1Q6NXT6 567 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 PRR18Q8N4B5 295 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 TOR1AIP2Q8NFQ8 470 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 FAM167AQ96KS9 214 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
COMMD3-212ENST00000479958 CGNL1Q0VF96 1302 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 NPHP4O75161 1426 aaPredicted RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 XRN1Q8IZH2 1706 aaKnown RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 NT5C1B-RDH14C9J2C7 533 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 PROM1O43490 865 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 TRIAP1O43715 76 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 SOAT2O75908 522 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 PIK3CGP48736 1102 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 FXR1P51114 621 aaKnown RBP eCLIP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 PSMC1P62191 440 aaKnown RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 PTPRRQ15256 657 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 GRASPQ7Z6J2 395 aaPredicted RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 CCDC146Q8IYE0 955 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 ADGRG5Q8IZF4 528 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 BOLLQ8N9W6 283 aaKnown RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 SLC30A5Q8TAD4 765 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 DDX17Q92841 729 aaKnown RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 RGMAQ96B86 450 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 ZNF764Q96H86 408 aaPredicted RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 BBC3Q96PG8 261 aaPredicted RBP6.66□□□□□ -1.34
COMMD3-212ENST00000479958 CNPPD1Q9BV87 410 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 SLAMF7Q9NQ25 335 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 SPATA31A3Q5VYP0 1347 aa6.66□□□□□ -1.34
COMMD3-212ENST00000479958 ATP7BP35670 1465 aa6.65□□□□□ -1.34
COMMD3-212ENST00000479958 USP32Q8NFA0 1604 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 F5H697 171 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 FTLP02792 175 aaPredicted RBP6.65□□□□□ -1.35
COMMD3-212ENST00000479958 FBLP22087 321 aaKnown RBP6.65□□□□□ -1.35
COMMD3-212ENST00000479958 PRDX5P30044 214 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 MTHFSP49914 203 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 HK3P52790 923 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 NXPH1P58417 271 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 NOGQ13253 232 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 HABP2Q14520 560 aaPredicted RBP6.65□□□□□ -1.35
COMMD3-212ENST00000479958 KIAA0895LQ68EN5 471 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 HEATR3Q7Z4Q2 680 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 B3GALNT2Q8NCR0 500 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 POC1BQ8TC44 478 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 SPATA5L1Q9BVQ7 753 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 AASDHPPTQ9NRN7 309 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 ABCF2Q9UG63 623 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 FEZ2Q9UHY8 353 aaPredicted RBP6.65□□□□□ -1.35
COMMD3-212ENST00000479958 ZDHHC8Q9ULC8 765 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 ANKRD6Q9Y2G4 727 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 ZBED9Q6R2W3 1325 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 NINLQ9Y2I6 1382 aa6.65□□□□□ -1.35
COMMD3-212ENST00000479958 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 PTCH1Q13635 1447 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 DIP2AQ14689 1571 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 ZNF785A8K8V0 405 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 MASP2O00187 686 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 C1RP00736 705 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 GNAI2P04899 355 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 RARBP10826 455 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms